PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g736990.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 714aa MW: 79033.5 Da PI: 8.8804 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.2 | 1.6e-07 | 616 | 665 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ Pd.00g736990.m01 616 RRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 665 6789999*******************9988889**************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 714 aa Download sequence |
MGEEKVWMCF ELLAKNRCAE EFLFLDSESW QLKRLDYGFN GYQVPATPRA TRSARRRGAI 60 RKRVDDNSMG AFDLLATIAG KLLLEGESSP ASSHTSKDQC AGTKENCLDG DKPLKVEPCD 120 QGSCDRRIPV SDHISQGPNQ SSCSKESPVH QNESSVMTTS NCSERFASDM LVSGKCKNET 180 GSFTSKIEAG SSGCREAGEF KLDGEVKTLI KDETNKSAKV LIGTGPDMCG LEDPVVWEGE 240 PPALVSSDSS TKVPMYVDHI PQRSFPTSRD DVKVVSRDDD ENSSGCTHPV TSIKYSRPAP 300 LRIGDRRIRK ILASKYWKVA PKLKDDIHSN SCKWLPCTKR MYRDQKPNYH NRKNCYKRQR 360 SQMNIPFKKR KLFDRSAVLN IDEGIRREGF FDSRGKGITG DASCSKMQGA AMNSSSLAGQ 420 HSSFQSRSSH VKLRIKSFRV PELFIEIPDT ATVGSLKKTV MDAVTAVLGG GVCVGVLLQG 480 KKVRDDNKTL LQTGISQDNQ LDSLGFTLEP NSSQTPPPLC SGDSPHMLPC DVLQPLTRYP 540 SGPTSEASPE PHTASLGNFI ESDHDSAPSP TDMSAEKSTT DSKALVAVPD MSVEALAVVP 600 GHRKSKRFDI GQRRIRRPFS VAEVEALVQA VEKLGTGRWR DVKLRAFDNA KHRTYVDLKD 660 KWKTLVHTAR ISPQQRRGEP VPQELLDRVL TAHAYWSQQQ AKQQLKQPET CLLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07540.1 | 1e-112 | MYB_related family protein |