PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g736090.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 195aa MW: 22060.4 Da PI: 4.8782 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.6 | 9.2e-16 | 2 | 41 | 5 | 46 |
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 T++E+ l ++++ ++G++ W++Iar+++ gRt++++k++w++ Pd.00g736090.m01 2 TPQEERLVLELHSKWGNR-WSRIARKLP-GRTDNEIKNYWRT 41 9*****************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MTPQEERLVL ELHSKWGNRW SRIARKLPGR TDNEIKNYWR TRMRKKAQEK KRAASPSSSS 60 SNCSSSSNIT STEGGASFYD TGGLEIKASS GAKKTGGDHQ EQEDDKKRDQ KEYSLDDIWK 120 DINLPEVNSI EPVYNGYSEE ACNIISCPLM ASPAPWEYCS DSLWEMDEEE SKMFLPTTSD 180 QFLSCFEYGK ASLTG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G46130.2 | 1e-53 | MYB_related family protein |