PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g731810.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 674aa MW: 73166 Da PI: 6.7447 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.3 | 1.3e-16 | 66 | 110 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE++++++a k++G W++I +++g ++t+ q++s+ qk+ Pd.00g731810.m02 66 RERWTEEEHKKFLEALKLYGRA-WRKIEEHVG-TKTAVQIRSHAQKF 110 78******************88.*********.************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 674 aa Download sequence |
MVGGLMLSPD MAAAQDQYDG SRSESVLSAN NGVSFSVSGL QLKDQFSNGN DSAPKARKPY 60 TITKQRERWT EEEHKKFLEA LKLYGRAWRK IEEHVGTKTA VQIRSHAQKF FSKVARDSNG 120 SNIISEEPID IPPPRPKRKP MRPYPRKLVH PVNKETFIVE RPTRSASPNL SVSEPENQSP 180 TSVLSVIGSD TLGSADSNTP SRSLSPVSSA ADVHGVDLNL SEPPNPSLEE SGSTSPAVAE 240 NGSLPNMQLS MKLELFPTDN VDASGVSAEE VSARSLKLFG RTVLVTDSHR PSSPTMGTSK 300 SLPSDVKEEK PVQTSTPCNF TATESASGSV EHVWDNFPYG VHPGMYFMQF QNQNSNMVES 360 GSAYPVPWWT LCPKLPFPFI PFHKPQAVKE HFDGNLGDPK EVEKEGSWTG SDAGSVNNEE 420 NGDKCLASTA LSHLPSSSVT TTTSLSISDW QSARATYYAA SDPRDAVGGA CGYGDLVKAG 480 YGMATVGLSE PLFERGQICG ACFELRCVDD MRWCIPGTSI IVTATNFCAP NYGFTADGGG 540 HCNPPNKHLV LPIEAFEKIA IWKAGNMPVQ YRRIKCRKEG GIRFTVDGSN IFISVLITNV 600 AGVGDIVSVK IKGSRTGWLP MGRNWGQNWH VSADLKNQPL SFEVTSSDGL TVTSYNVAPK 660 AWNFGQTFEG KQFP |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 572 | 579 | RRIKCRKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G17300.1 | 2e-60 | MYB_related family protein |