PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g731810.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 660aa MW: 71823.5 Da PI: 6.8705 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.4 | 1.3e-16 | 52 | 96 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE++++++a k++G W++I +++g ++t+ q++s+ qk+ Pd.00g731810.m01 52 RERWTEEEHKKFLEALKLYGRA-WRKIEEHVG-TKTAVQIRSHAQKF 96 78******************88.*********.************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 660 aa Download sequence |
MDQYDGSRSE SVLSANNGVS FSVSGLQLKD QFSNGNDSAP KARKPYTITK QRERWTEEEH 60 KKFLEALKLY GRAWRKIEEH VGTKTAVQIR SHAQKFFSKV ARDSNGSNII SEEPIDIPPP 120 RPKRKPMRPY PRKLVHPVNK ETFIVERPTR SASPNLSVSE PENQSPTSVL SVIGSDTLGS 180 ADSNTPSRSL SPVSSAADVH GVDLNLSEPP NPSLEESGST SPAVAENGSL PNMQLSMKLE 240 LFPTDNVDAS GVSAEEVSAR SLKLFGRTVL VTDSHRPSSP TMGTSKSLPS DVKEEKPVQT 300 STPCNFTATE SASGSVEHVW DNFPYGVHPG MYFMQFQNQN SNMVESGSAY PVPWWTLCPK 360 LPFPFIPFHK PQAVKEHFDG NLGDPKEVEK EGSWTGSDAG SVNNEENGDK CLASTALSHL 420 PSSSVTTTTS LSISDWQSAR ATYYAASDPR DAVGGACGYG DLVKAGYGMA TVGLSEPLFE 480 RGQICGACFE LRCVDDMRWC IPGTSIIVTA TNFCAPNYGF TADGGGHCNP PNKHLVLPIE 540 AFEKIAIWKA GNMPVQYRRI KCRKEGGIRF TVDGSNIFIS VLITNVAGVG DIVSVKIKGS 600 RTGWLPMGRN WGQNWHVSAD LKNQPLSFEV TSSDGLTVTS YNVAPKAWNF GQTFEGKQFP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 558 | 565 | RRIKCRKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17300.1 | 1e-60 | MYB_related family protein |