PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g716730.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | TCP | ||||||||
Protein Properties | Length: 158aa MW: 17420.9 Da PI: 10.5328 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 78.5 | 1.9e-24 | 36 | 83 | 2 | 49 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktie 49 a+kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++ti+ Pd.00g716730.m01 36 AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTID 83 78*********************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 158 aa Download sequence |
MSNSEAPNNE LTNGGGGGGM VEQQASQRPS SNGVLAVKKP PSKDRHSKVD GRGRRIRMPI 60 ICAARVFQLT RELGHKSDGQ TIDNSRWARP QRPEWEITFQ DISICWLLCR AGTGILVGEK 120 TTRVEDPDYR PSVSGGWFVL VVVCFVGLLP VKRKKHVG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08330.1 | 7e-29 | TCP family protein |