PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g711230.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HSF

Protein Properties

Length: 637aa MW: 71462.5 Da PI: 5.5051

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g711230.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.8	2.4e-35	78	169	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k++++++d++l+++isw + gnsfvv+d+ ef++ +Lp+ Fkh+nf+SFvRQLn+YgF+kv++++ weF ++ Fk+gk++ll Pd.00g711230.m01 78 FLSKTFDLVDDPSLDSIISWGSGGNSFVVWDPLEFSRLILPRNFKHNNFSSFVRQLNTYGFRKVDTDK---------WEFGNEAFKRGKRHLL 161 9**************************************************************999.........************ PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 +ki+r+ks Pd.00g711230.m01 162 KKIQRRKS 169 ****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 637 aa Download sequence
MSEPLLGSQS IPSFTCPLME FEAFCALNPS ESSWSSGAFE FDEKAPTATS SFMDAGGAEH 60 VAVPQPLECL QDSPVPPFLS KTFDLVDDPS LDSIISWGSG GNSFVVWDPL EFSRLILPRN 120 FKHNNFSSFV RQLNTYGFRK VDTDKWEFGN EAFKRGKRHL LKKIQRRKSP QSLQVGPSAD 180 AGRPRLEGDI ETLRKERSML MQEVGDLQQQ QRGTVHHMKV VNERLQSAEQ RQKQMVSFLS 240 KLLQNPAFLA RLQQKTGQKG IDSPRMKRKF VKQHQHELGK SDSCMQGQIV KYQPAWRNLS 300 AVPDVNPVVP IEQSPDNLSQ VMAGKLGLVA ESKPYQFADV ASDELNLSAE AVMRGFIKTP 360 EQEGEGASSM GAEDPFQKGK SVLSPEQEVN PEYHVCFQED FGKNKMFPEL FSPGIDSMIK 420 QEDIWSMGFD VSAGMSSSSN ELWSNLVNYD VPEMGVTGGL LDIWDIGPLH AAGGSGIDKR 480 PADESAFDEP DSQAGQLKVD TSKCLNPCKG QHISVGHACS IALSSSKNSS KMNLFDSFNL 540 LDFHHFFSWG VNIYSEEDKV KIDERGCLGV SESTFCHSST NWHLEQHYWL YLFKETLEQP 600 STAQAWLTVS LVWYGGPQNH LFKVRCFWDK QEYLFYL

Sequence ? help Back to Top

Protein Sequence Length: 637 aa Download sequence

MSEPLLGSQS IPSFTCPLME FEAFCALNPS ESSWSSGAFE FDEKAPTATS SFMDAGGAEH  60
VAVPQPLECL QDSPVPPFLS KTFDLVDDPS LDSIISWGSG GNSFVVWDPL EFSRLILPRN  120
FKHNNFSSFV RQLNTYGFRK VDTDKWEFGN EAFKRGKRHL LKKIQRRKSP QSLQVGPSAD  180
AGRPRLEGDI ETLRKERSML MQEVGDLQQQ QRGTVHHMKV VNERLQSAEQ RQKQMVSFLS  240
KLLQNPAFLA RLQQKTGQKG IDSPRMKRKF VKQHQHELGK SDSCMQGQIV KYQPAWRNLS  300
AVPDVNPVVP IEQSPDNLSQ VMAGKLGLVA ESKPYQFADV ASDELNLSAE AVMRGFIKTP  360
EQEGEGASSM GAEDPFQKGK SVLSPEQEVN PEYHVCFQED FGKNKMFPEL FSPGIDSMIK  420
QEDIWSMGFD VSAGMSSSSN ELWSNLVNYD VPEMGVTGGL LDIWDIGPLH AAGGSGIDKR  480
PADESAFDEP DSQAGQLKVD TSKCLNPCKG QHISVGHACS IALSSSKNSS KMNLFDSFNL  540
LDFHHFFSWG VNIYSEEDKV KIDERGCLGV SESTFCHSST NWHLEQHYWL YLFKETLEQP  600
STAQAWLTVS LVWYGGPQNH LFKVRCFWDK QEYLFYL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	161	167	LKKIQRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03720.1	3e-94	HSF family protein