PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g692750.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 312aa    MW: 35149.9 Da    PI: 5.1629
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g692750.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.37.5e-131156146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                      +g+W +eEde l++ vk+ G+++W++I ++  + Rt+k+c++rw +
  Pd.00g692750.m01 11 KGPWKAEEDEVLLNHVKKCGPRDWSSIRSKGLLQRTGKSCRLRWVN 56
                      79*************************8887799**********87 PP
2Myb_DNA-binding42.21.9e-1367106344
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 
                       +++ eE+   +d+ +q+G++ W++Ia +++ gRt++++k++w
  Pd.00g692750.m01  67 KFSLEEERVVIDLQAQFGNK-WARIATYLP-GRTDNDVKNFW 106
                       799*****************.*********.*********** PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MEGRREEGIR KGPWKAEEDE VLLNHVKKCG PRDWSSIRSK GLLQRTGKSC RLRWVNKLRP  60
NLKNGCKFSL EEERVVIDLQ AQFGNKWARI ATYLPGRTDN DVKNFWSSRQ KRLARILQAS  120
APSKSHKNKR EGPVYDEVLT LEAPKFSCSS EGESSSQAQS CSSPPCFGNS EIIKMVPLPD  180
LVKPKLLALE ANPVQQELAP TEKNPWIDPQ PLIPFLQNPQ PQTDLEFSLE TQELLARFDP  240
YFDMLTPLVA SELGNGGEQL LMEPPFLEPV GNCGSGERDK IGNPITPDCV FDDLPVDMFD  300
QIELLPNSSE QH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60460.14e-71MYB family protein