PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g687830.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | Trihelix | ||||||||
Protein Properties | Length: 380aa MW: 44435.4 Da PI: 6.1706 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 87.8 | 1.2e-27 | 55 | 151 | 1 | 85 |
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpy 81 +Wt+q+v++Li+a+++++e+ ++++ +kk++W++vsk+m+ergf++sp+qC++k+++lnkrykk++++ +++ +++++++ ++ Pd.00g687830.m01 55 KWTDQMVKLLITAVSYIGEDTSSDCgsggrrkystlQKKGKWKSVSKVMAERGFHVSPQQCEDKFNDLNKRYKKLNDMLGRGtSCQVVENQAL 147 7*********************99888899999999**********************************************66999999888 PP trihelix 82 fdql 85 +d + Pd.00g687830.m01 148 LDVI 151 7765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 380 aa Download sequence |
MHTCDQTISM MDYNKGERSK NSASDEDEPS YTEEGTDGHA EGNRGKKGSP WQRVKWTDQM 60 VKLLITAVSY IGEDTSSDCG SGGRRKYSTL QKKGKWKSVS KVMAERGFHV SPQQCEDKFN 120 DLNKRYKKLN DMLGRGTSCQ VVENQALLDV IDYLTEKEKD DVRKILSSKH LFYEEMCSYH 180 NGNRLHLPHD PALQKSLQRA LRRDEHDNDD LRRHHHDDLD EDDQDMETDE HEDFEENNAS 240 HGDNRGIYVL EDSVKRLRQG PGREEFNYGS SLNPQDCNKS SYCHPPIPQA DMNQVLPDGT 300 KAAWLQKQWI ESRSLQLEEQ KLQIQVEMLE LEKQRFKWQR FSKKRDRELE KLRMENERMK 360 LENERMALEL KRKEMGAGFS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21200.1 | 1e-157 | Trihelix family protein |