PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g681040.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | TCP | ||||||||
Protein Properties | Length: 367aa MW: 40745 Da PI: 8.5651 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 122.5 | 5e-38 | 167 | 270 | 3 | 105 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............ssssaseceaesssssas 83 g kdrhski+T++g+RdRR+Rls+++a++fFdLqd+LGfdk+sktieWL++++k +ikel + + + +++s Pd.00g681040.m01 167 GNKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFTKSKSSIKELKQHlnisplaayscnT-----------NANATS 248 78*************************************************************7664444443320...........222222 PP TCP 84 nsssgkaaksaakskksqksaa 105 +s+++++++s+++++++ +s+ Pd.00g681040.m01 249 TSTITAKMNSSTSENSEVASKI 270 2222222222222222211111 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 367 aa Download sequence |
MFPSSSSASN YQLPFPCDTN QQPQLLEKSS TNIIDQHGHE NPNSISHDDH HIRQYYSHYS 60 EDHQQQAPNN FLEHDGLLLS YLLSQQQLLV GSSSPNMNSA TSHHVQVHDT TEISVVASNS 120 NKKVLDRVDE GRTAPAATSK GCSSKKKSNT SNGESKNAKA PRKRSSGNKD RHSKIYTAQG 180 PRDRRMRLSL QIARKFFDLQ DMLGFDKASK TIEWLFTKSK SSIKELKQHL NISPLAAYSC 240 NTNANATSTS TITAKMNSST SENSEVASKI QETANGDAHS IGTLERDKKN RKLCGHYLWS 300 SNCPNDQLFE PGMMMNSMVM SINHHDEKVV GSTTIPSGAN SEDYDFPSFP GNWGQINNSK 360 NITGYCK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68800.1 | 1e-32 | TCP family protein |