PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g674740.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 170aa MW: 19757.2 Da PI: 5.3372 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.4 | 3.2e-08 | 9 | 31 | 23 | 46 |
-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqk 46 +W++Ia +++ gRt++++k++w++ Pd.00g674740.m01 9 RWSLIAGRLP-GRTANDVKNFWNT 31 5*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence |
MEPGFSTFRW SLIAGRLPGR TANDVKNFWN TRLGRKMASV VVEKVKEKSP ETKKDIAVRP 60 QSRRLSKTSH YLSGHKTVTS RHNQPEENFS KLPILPSSPI EDEVDWWETL LEDEDNVQRT 120 KCSCLLLEED HFTNCCVEDF AQWTITDFRY LEDCPCWIGS SDMDLWNLST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09460.1 | 4e-12 | MYB family protein |