PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g673210.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TCP

Protein Properties

Length: 320aa MW: 32832.4 Da PI: 6.0227

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g673210.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	83.1	7.1e-26	1	74	24	103
TCP 24 lsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaakskksqks 103 ++a+caar+F+L++eL +++d++tieWLlqqa+pai+++tgt++++a+++ + s +ss+s+ s++ +sk++++s Pd.00g673210.m01 1 MPATCAARVFQLTRELSHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSsLNISLRSSGSTLSAP-------PSKSASHS 74 9**********************************************9997777777777744444.......22222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MPATCAARVF QLTRELSHKS DGETIEWLLQ QAEPAIIAAT GTGTIPANFS SLNISLRSSG 60 STLSAPPSKS ASHSFPGALA LAHHPHYDEG FPHSEALPSG GGDSGGGDST DSYMRKRFRE 120 DLFKDDNQGR GEGGGGSSGG GGSPSGNKAF KSSGGLQLQK QQQGSEGEAG PSGLLRPPSN 180 ILPPTAMWAV APAPNSGAAG STFWMLPVTA GAGGPSMPTG TSGAGPSEAA QMWTFPSAPA 240 SHGSTLQAPL HFMPRFNLPS SLEFQQAGSR GNPLQLGSML MQQQPSQHLG LGVADSNLGM 300 LAALNASYSR DLEVEFEMMG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	4e-45	TCP family protein