PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g666640.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TCP

Protein Properties

Length: 374aa MW: 41538 Da PI: 8.9319

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g666640.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	122.9	3.6e-38	167	293	3	121
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......ssssaseceaesssssasnsssg 88 g kdrhski+T++g+RdRR+Rls+++a++fFdLqd+LGfdk+sktieWL++++k +ikel + +c+++++ ++s+s+++ Pd.00g666640.m01 167 GNKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFTKSKSSIKELKQHlnisplaA----YSCSTNAN--ATSTSTIT 253 78*************************************************************66644330....44422222..22222222 PP TCP 89 ......kaaksaakskksqksaasalnlak.esrakarar 121 +++s+ sk +++ + a+++ e +k r+ Pd.00g666640.m01 254 akmnssTSENSEVASKIQETANGDAHSIGTlERDKKNRKL 293 1111112222222333333333333344333333444443 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MFPSSSSASN YQLPFPCDTN QQPQLLEKSS TNIIDQHGHE NPNSISHDDH HIRQYYSHYS 60 EDHQQQAPNN FLEHDGLLLS YLLSQQQLLV GSSSPNMNSA TSHHVQVHDT TEISVVASNS 120 NKKVLDRVDE GRTAPAATSK GCSSKKKSNT SNGESKNAKA PRKRSSGNKD RHSKIYTAQG 180 PRDRRMRLSL QIARKFFDLQ DMLGFDKASK TIEWLFTKSK SSIKELKQHL NISPLAAYSC 240 STNANATSTS TITAKMNSST SENSEVASKI QETANGDAHS IGTLERDKKN RKLCMMRTRS 300 GGHYLWSSNC PNDQLFEPGM MMNSMVMSIN HHDEKVVGST TIPSGANSED YDFPSFPGNW 360 GQINNSKNIT GYCK

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MFPSSSSASN YQLPFPCDTN QQPQLLEKSS TNIIDQHGHE NPNSISHDDH HIRQYYSHYS  60
EDHQQQAPNN FLEHDGLLLS YLLSQQQLLV GSSSPNMNSA TSHHVQVHDT TEISVVASNS  120
NKKVLDRVDE GRTAPAATSK GCSSKKKSNT SNGESKNAKA PRKRSSGNKD RHSKIYTAQG  180
PRDRRMRLSL QIARKFFDLQ DMLGFDKASK TIEWLFTKSK SSIKELKQHL NISPLAAYSC  240
STNANATSTS TITAKMNSST SENSEVASKI QETANGDAHS IGTLERDKKN RKLCMMRTRS  300
GGHYLWSSNC PNDQLFEPGM MMNSMVMSIN HHDEKVVGST TIPSGANSED YDFPSFPGNW  360
GQINNSKNIT GYCK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	2e-32	TCP family protein