PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g651860.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 706aa MW: 78290.4 Da PI: 7.5254 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.1 | 1.3e-10 | 36 | 87 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT......TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg......kgRtlkqcksrwqkyl 48 +W t+E++ll++av+++G+ +W+++a ++ +t+ ck ++++++ Pd.00g651860.m01 36 SWGTWEELLLACAVHRFGTQSWDAVATELRkrssnlHLLTPHACKRKFHDLR 87 7*****************************9999997799999999999875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 706 aa Download sequence |
MNVESVVAEG SCDNGLSDYM IFLMDKPNFP EKQTPSWGTW EELLLACAVH RFGTQSWDAV 60 ATELRKRSSN LHLLTPHACK RKFHDLRRRF SQNDSASGKD DDTPPTAWLD QLRQRRLDEL 120 RRELQRYDHS IVSLQLKVER LTEVREQSLR ETEKPVEKSD LEKTGEEEIE HKDAEPEDSS 180 PEKKGSSGEV SEHDDRSCNE SNTTDPIHEI PETEVADADK GSGQTEPAGE EIEPVEKLDN 240 PVVEDSCNGS SDSVVKETAV VEAEKGNSGE LKESVAESKG REEEEGTKVS PSNSEVQSSA 300 NLSRKLGQEP KSGGPGGPDR PEEPSEPDQE DESPAMKGVP VESQPLVEFL GILRSHKFAS 360 FFERRLHSQE TPIFKNMIRQ YVDFELVQTR LEGGRYEPCS RFLFFRDLLL ICNNAIVFFG 420 KKSPEYKAAC ELQLLVSKEM VLQAPKQDPP PKEETPKPPA PPLNQDPETS DSLLAKSKLS 480 LPLNACRKRS SVTARASTTS SSGPDRKKEQ ITTSFRDVKP AISWKQKEES SDEVEKLHVT 540 KKRRKERLRS SSRNNSSKNG RSRGNTNNDR NSEANDGFSS RVVTSNENSE SKAETEKKSN 600 TNSSGKKRSA ADFLSRMKRS STSKTGLSAE TSKTPDNNSK GGRAEQRKNG NGKGNAQKDQ 660 GSRRGSGGRQ AAKEQGSPTK RSVGRPSKRA AAPATAGPAK RTRQRG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 541 | 545 | KKRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57980.1 | 2e-59 | MYB_related family protein |