PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g650060.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | TALE | ||||||||
Protein Properties | Length: 604aa MW: 67466.3 Da PI: 6.4392 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 25.7 | 2e-08 | 481 | 519 | 18 | 54 |
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +F++ ++yp+ +e+ LA k gLt +qV++WF N R + Pd.00g650060.m01 481 MFQNflHPYPKDAEKHVLAVKSGLTRNQVSNWFINARVR 519 5787779******************************88 PP | |||||||
2 | BELL | 77.3 | 2.3e-25 | 355 | 424 | 1 | 71 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeq 71 ++qe++ kk+kLl+ll+++d+ Y+q+v++++tv+s+F+a+++ ++ ++++++Al++iS +++L+++i+ + Pd.00g650060.m01 355 QKQEIKTKKSKLLTLLQMLDDCYNQCVDEIHTVVSAFHAATETDP-HIHARFALQTISVLYKNLRERISTH 424 579******************************************.**********************976 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 604 aa Download sequence |
MYNVPTDLTA RNSVVMDGIV PHTTMNSLVQ SYSFDLNHQN HGMALVPALS SFPGEPVVHS 60 HSEFNGTNGD GIVESNPFVT SQRRHNVRDS SFISSSFADN TVFQATPHSA ASLATLLAAR 120 GSLQENLNNL AISGTPVSSS EAYASNDCSN NSNSLFATSV NCGYDEILGS ISSQWEINKY 180 AAPSELGERT SVRTGFQPYS PTGNLDPNGW LSSNGENAMT YHSYSSCKFS NELALTLATS 240 SPAIVGGVDI RNQCSDIGSS GMAHPSLNQT RFGSSEQNSC NSEELSLSFG SYKPPQLSQV 300 ICGSRYLHVV QEILFDIASY SLENLDQSSF SSARIMSENA DSDSRFEVHK EPALQKQEIK 360 TKKSKLLTLL QMLDDCYNQC VDEIHTVVSA FHAATETDPH IHARFALQTI SVLYKNLRER 420 ISTHFLAMTA NSNPASPTES ERSFEIHKQL ALQHLKKKEH QIWRPQRGLP ERSVSVLRAW 480 MFQNFLHPYP KDAEKHVLAV KSGLTRNQVS NWFINARVRL WKPMIEEMYS EMNRRKTRQS 540 DNTERNNRSH HHNIRAMAGL VVVFDFDKTI IDWDSDNWVV EELGVKDLFT QLLPTMPWNS 600 LMIE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G32980.1 | 4e-86 | TALE family protein |