PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g645970.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

LBD

Protein Properties

Length: 263aa MW: 30050.1 Da PI: 4.6171

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g645970.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	72.8	6.7e-23	2	73	30	101
DUF260 30 fanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkeel 101 f+n+hklFG+sn++k+lk+l++e + +am+s++y+A++r + PvyG+ +vi++lq ql +++el++++++l Pd.00g645970.m01 2 FQNAHKLFGVSNIVKILKNLEPEMKFEAMRSIIYQANIRDKFPVYGCWEVIWQLQYQLLLAEEELQAVQAQL 73 9******************************************************************99885 PP

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence
MFQNAHKLFG VSNIVKILKN LEPEMKFEAM RSIIYQANIR DKFPVYGCWE VIWQLQYQLL 60 LAEEELQAVQ AQLAMYRQHH HHQHQISSVP EYVTSQLELG MAPPNNSLPL FNHNPQPYNN 120 NNNNAMPALP VTQHHHQQQS YSNSSDAAYS SVYIDSKDNN AANPLWVSNP CTTNNNSNND 180 NSETIQSQLG VLQPLSLQPD VVQDYDELHP FFDTIDDRQS YIDSKEAYES SSEESFKDTT 240 QSMEYAENTL KNAASCYSLT SVN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47870.1	4e-14	LBD family protein