PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g644330.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TCP

Protein Properties

Length: 277aa MW: 29847.6 Da PI: 9.8984

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g644330.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	123.2	3e-38	28	114	2	88
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg 88 a+k+++++++h kv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tg+++ +as+ a+ss+s+++ ss + Pd.00g644330.m01 28 APKRSSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTVPASALgAAGSSVSEQG-SSVS 114 789*************************************************************9999988854444444444.3333 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MAENKPAQIK DLQILKVNKD DENKKHLAPK RSSNKDRHKK VDGRGRRIRM PALCAARVFQ 60 LTRELGHKSD GETIQWLLQQ AEPSIIAATG SGTVPASALG AAGSSVSEQG SSVSSVSSGL 120 HTRMEGLIRP SVGSEGSANW AFHMGRSNVA SGVWPLPFLS GVRSGFDQNS GQATVNFGSE 180 NLNIMQHKFG FHGFDVPGMN LGSMGFPTIL SGSNQQVPGL ELGLSQDGHI GVVSSQALTQ 240 FHQHKGQRPE EKIKIAQILA FAGLPFFQYF SFDQDEV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	7e-64	TCP family protein