PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g643070.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 76aa    MW: 8630.27 Da    PI: 4.0653
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g643070.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.59.9e-112869245
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                      + ++++E+ l+++  ++ G + W++Ia +++ gRt++++  +w 
  Pd.00g643070.m01 28 LQFSEDEEALIIRMYNLVGER-WALIAGRIP-GRTAEEIEKYWS 69
                      579******************.*********.***********5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 76 aa     Download sequence    
MADSEHSSSD DSFSDSQATE KSRQEPELQF SEDEEALIIR MYNLVGERWA LIAGRIPGRT  60
AEEIEKYWSS TNSTSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01380.11e-18MYB_related family protein