PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g632720.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 704aa MW: 77816 Da PI: 8.8331 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.2 | 1.6e-07 | 606 | 655 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ Pd.00g632720.m01 606 RRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 655 6789999*******************9988889**************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 704 aa Download sequence |
MGEEKVWMCF ELLAKNRCAE EFLFLDSESW QLKRLDYGFN GYQVPATPRA TRSARRRGAI 60 RKRVDDNSMG AFDLLATIAG KLLLEGESSP ASSHTSKDQC AGTKENCLDG DKPLKVEPCD 120 QGSCDRRIPV SDHISQGPNQ SSCSKESPVH QNESSVMTTS NCSERFASDM LVSGKCKNET 180 GSFTSKIEAG SSGCREAGEF KLDGEVKTLI KDETNKSAKV LIGTGPDMCG LEDPVVWEVE 240 PPALVSSDSS TKVPMYVDHI PQRSFPTSRD DVKVVSRDDD ENSSGCTHPV TSIKYSRPAP 300 SRIGDRRIRK ILASKYWKVA PKLKDDIHSN SYRDQKPNYH NRKNCYKRQR SQMNIPFKKR 360 KLFDRSAVLN IDEGIRREGF FDSRGKGITG DASCSKMQGA AMKSSSLAGQ HSSFQSRSSH 420 VKLRIKSFRV PELFIEIPDT ATVGSLKKTV MDAVTAVLGG GVCVGVLLQG KKVRDDNKTL 480 LQTGISQDNQ LDSLGFTLEP NSSQTPPPLC SGDSPHMLPC DVLQPLTRYP SGPTSEASPE 540 PHTASLGNFI ESDHDSAPSP TDMSAEKSTT DSKALVAVPD MSVEALAVVP GHRKSKRFDI 600 GQRRIRRPFS VAEVEALVQA VEKLGTGRWR DVKLRAFDNA KHRTYVDLKD KWKTLVHTAR 660 ISPQQRRGEP VPQELLDRVL TAHAYWSQQQ AKQQLKQPET CLLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07540.1 | 1e-115 | MYB_related family protein |