PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g622650.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 274aa    MW: 31084.6 Da    PI: 8.0168
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g622650.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.94.9e-10187230755
                       HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                       ++ ++RR+ri +++  L+el+P+ +      K++ +++LekA+ Y+k Lq
  Pd.00g622650.m01 187 IAAKNRRERISERLKILQELVPNgC------KVDLVTMLEKAISYVKFLQ 230
                       5679*******************77......******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MKERFIETKK KEWVSRATSN YHQPDHQVAH SVINFKSSGY NSFFQNSESL LSFEKNSKQN  60
ILKTRNDKDE HFNCDDDLHH GNYQWNHTAS VSDPRLSGDF NCFQTASNYS SMPNTSKDDH  120
GDEAYGWLYS EATVVVDGFQ EPESQEGFHK RPHTGEAMQP LKKQCINSGT KKPKPKSSSP  180
TKDPQSIAAK NRRERISERL KILQELVPNG CKVDLVTMLE KAISYVKFLQ LQVKVLATDE  240
FWPVQGGKAP DISQVKEAID AILPSQRDTS SSSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66470.11e-58bHLH family protein