PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g614510.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 299aa MW: 34266.9 Da PI: 7.1992

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g614510.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.8	3.8e-16	57	104	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+++Ed+ l ++++++G g W+ +r+ g++R++k+c++rw++yl Pd.00g614510.m01 57 RGAWSAWEDKTLTNYIELHGEGKWRDLPRRAGLKRCGKSCRLRWLNYL 104 89********************************************97 PP
2	Myb_DNA-binding	54.7	2.4e-17	110	154	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ ++eE+el+v+++k+lG++ W++Ia +++ gRt++++k++w++ Pd.00g614510.m01 110 RGNISAEEEELIVRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTN 154 7899****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MLAREIDLSV TELCCCQLKS AKIKPNVPIQ LGKWQRFQSF IFCMCRTNIL IKHGLNRGAW 60 SAWEDKTLTN YIELHGEGKW RDLPRRAGLK RCGKSCRLRW LNYLRPDIKR GNISAEEEEL 120 IVRLHKLLGN RWSLIAGRLP GRTDNEIKNY WNTNLSKKVE QACSKQDTKK SQSHQVQVIR 180 TKAFKCKNVV VPSHLDNGHD DDQMVDRSNN VAPGFLMDFD TNDLFISDQL LNLDFHQAQS 240 SGCDQVLVDG TSKIEDFLMA TDDHDHNPIF QPSDLEEPVD LNVLSSFLNS EDGGQWIIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	8e-62	MYB family protein