PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g613130.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 243aa MW: 26899.9 Da PI: 6.8893 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.3 | 2.7e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd l+++ + +G+g +W + + + g++R++k+c++rw++yl Pd.00g613130.m01 14 RGPWSPEEDTTLKNYLHNHGTGgNWISLPTKAGLNRCGKSCRLRWLNYL 62 89*********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MGRAPCCDKS KVKRGPWSPE EDTTLKNYLH NHGTGGNWIS LPTKAGLNRC GKSCRLRWLN 60 YLRPDIKRGG FTEEEDNLIC TLYGTIGTSQ LPGRTDNDVK NYWNTKLKKK FFAANNMKLA 120 SREFPASVPK FEFGTPQDHG TSSSCFDGTL PYLMDVSLGQ SFDQQKQISQ FPHSNFLEVN 180 DFGTCGSRSF TNISSSQEAS SLPTSSILGL ENNYTPWSGD ESGALTDYGF EPPADALLGN 240 FGY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49690.1 | 4e-63 | MYB family protein |