PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g612370.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 351aa MW: 40159.8 Da PI: 7.5816

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g612370.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	36.9	6.3e-12	132	238	1	98
EEEE-..-HHHHT.T-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--.TT-EEEEEE CS B3 1 ffkvltpsdvlks.grlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLk.egDfvvFkl 84 f+k+l sdv + +rl++ k+ +e++ g++ +e++++t +d g+++ + ++++ ++ +vlt+GWk F+++ +L Dfv++ Pd.00g612370.m01 132 FEKQLALSDVKDNqCRLSMNKEDVENNimpllrnGENLNEGIDVTTYDMAGNEYPMVFKVWATK-VHVLTGGWKTFCNDLRLVeNQDFVTLWI 223 89999999999888********999**966677999************999997.789***********985779999875 PP -SS.SEE..EEEEE- CS B3 85 dgr.sefelvvkvfr 98 ++ +++ l++ +++ Pd.00g612370.m01 224 FRHvDNGGLCFAIHS 238 555566666776665 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MASREDHEDP GYGDGMMTSS TEEGAYLLLH LKHTILNPET ARNLEHMKSK ILSGIKLKSP 60 SGSKRKALRI QEPEAPQARE ATNGAARGRS LSRELQFQQQ ERGGLFYGNY TPPDLPPIPS 120 LQNLIQDCSK PFEKQLALSD VKDNQCRLSM NKEDVENNIM PLLRNGENLN EGIDVTTYDM 180 AGNEYPMVFK VWATKVHVLT GGWKTFCNDL RLVENQDFVT LWIFRHVDNG GLCFAIHSRR 240 LSMNKEDVEN NIMPLLRNGE NLNEGIDVTT YDMAGNEYPM VFKVWATKVH VLTGGWKTFC 300 NDLRLVENQD FVTLWIFRHV DNGGLCFAIY SRRLPVFEPI KKKRPIRKNY H

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MASREDHEDP GYGDGMMTSS TEEGAYLLLH LKHTILNPET ARNLEHMKSK ILSGIKLKSP  60
SGSKRKALRI QEPEAPQARE ATNGAARGRS LSRELQFQQQ ERGGLFYGNY TPPDLPPIPS  120
LQNLIQDCSK PFEKQLALSD VKDNQCRLSM NKEDVENNIM PLLRNGENLN EGIDVTTYDM  180
AGNEYPMVFK VWATKVHVLT GGWKTFCNDL RLVENQDFVT LWIFRHVDNG GLCFAIHSRR  240
LSMNKEDVEN NIMPLLRNGE NLNEGIDVTT YDMAGNEYPM VFKVWATKVH VLTGGWKTFC  300
NDLRLVENQD FVTLWIFRHV DNGGLCFAIY SRRLPVFEPI KKKRPIRKNY H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03170.1	7e-29	B3 family protein