PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g612360.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 341aa    MW: 38237.7 Da    PI: 5.0729
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g612360.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.69.8e-18218323198
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--.TT-EEEEEE- CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLk.egDfvvFkld 85 
                       f+k+ltpsdv+k+grl+l k+++e+h       g++++e++++t +d +g+++ +k++ ++++  yvl+kGWk F+++ gL  + Df+++ + 
  Pd.00g612360.m01 218 FEKQLTPSDVSKTGRLRLNKEYVENHikpvlikGENPNEGIDVTTYDMEGNEYPMKFTTWGTD-LYVLSKGWKTFCHDLGLVeTQDFLTLWVF 309
                       99*******************************99999*******************878775.7***************98799***98866 PP

                       SS.SEE..EEEEE- CS
                B3  86 gr.sefelvvkvfr 98 
                       ++ +++ l++ +++
  Pd.00g612360.m01 310 RHaKNGGLCFAIHS 323
                       66677777777766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MADDHNDDLP NEFAAAFSDS ESSNDELEGN NEPAENAQEE LAAATLQGTE VEAIVAQAPA  60
VASLQHSTAF QEPAVASLQR STRFQESAVM AAHDMPDQPQ DREDPSYEDK EMTDSIKGAH  120
DLLYLKHKIL DYKTARKLEH MKSKILSGIE LNSPSGSKQK ALQIQESEAT NGAAQGRREL  180
QFQQEEGGGG LFYGHYAPPD LPPITSLQKL IQDCCKPFEK QLTPSDVSKT GRLRLNKEYV  240
ENHIKPVLIK GENPNEGIDV TTYDMEGNEY PMKFTTWGTD LYVLSKGWKT FCHDLGLVET  300
QDFLTLWVFR HAKNGGLCFA IHSRRLPVFE TIKKRRQRKQ N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G03170.18e-26B3 family protein