PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g597250.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | GATA | ||||||||
Protein Properties | Length: 270aa MW: 29494 Da PI: 4.7281 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 58.1 | 1.2e-18 | 189 | 222 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 Cs+C++ kTp+WR gp g ktLCnaCG+++++ + Pd.00g597250.m01 189 CSHCHVQKTPQWRTGPLGAKTLCNACGVRFKSGR 222 *******************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence |
MELCMEAKAL KSSLRRELAL KSNQQALIDE FWCATGISGV PSEDFSVDDL LDLSNGEFED 60 GSVEEEEEEK DSVSVDDESS NSSNFVSADS ESALASQLLV PDDDLAGLEW VSHFVDDSLL 120 DLSLLHPVGT QKPEALALTR SEPEAKLVQS TPTCTDVFVG EPATKKQKKK PAVQTGVDGS 180 VGVQFQRRCS HCHVQKTPQW RTGPLGAKTL CNACGVRFKS GRLFPEYRPA CSPTFSGDVH 240 SNSHRKVLEM RKRKEAGGPE PVLNRVIPSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36240.1 | 1e-44 | GATA family protein |