PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g591960.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | C2H2 | ||||||||
Protein Properties | Length: 406aa MW: 46877.8 Da PI: 7.8961 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.2 | 0.0012 | 56 | 78 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C++Cg + s ks+ ++Hi +H Pd.00g591960.m01 56 YYCEYCGICRSKKSLITSHILSH 78 89*******************96 PP | |||||||
2 | zf-C2H2 | 20 | 1.9e-06 | 101 | 122 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ Cg +F+ + +Lk+H+++H Pd.00g591960.m01 101 TCQECGVTFRKPAHLKQHMQSH 122 6*******************99 PP | |||||||
3 | zf-C2H2 | 15.9 | 3.8e-05 | 128 | 152 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C+ dC+ s++rk++L+rH+ H Pd.00g591960.m01 128 YICSvdDCHSSYRRKDHLNRHLLQH 152 89*******************9887 PP | |||||||
4 | zf-C2H2 | 13.6 | 0.0002 | 157 | 182 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 +kCp +C++ F + n++rH + H Pd.00g591960.m01 157 FKCPieNCNREFGFQGNMTRHVNElH 182 89*******************99888 PP | |||||||
5 | zf-C2H2 | 15.4 | 5.2e-05 | 197 | 221 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++C+ Cgk+F+ s L++H +H Pd.00g591960.m01 197 HVCKeiGCGKVFRFASRLRKHEDSH 221 79*******************9888 PP | |||||||
6 | zf-C2H2 | 15.4 | 5.4e-05 | 288 | 312 | 2 | 23 |
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 kC C+ +F++ksnL +H + H Pd.00g591960.m01 288 KCDykGCHHTFTTKSNLAKHVKAvH 312 788889**************99877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 406 aa Download sequence |
MKTLDSLRCP SETSGSQSPN AVACSLVGET FRVGALAMDK GQAEMEGPIF RDIRRYYCEY 60 CGICRSKKSL ITSHILSHHK DEMEMSNVDE DREVEQEKSN TCQECGVTFR KPAHLKQHMQ 120 SHSLERPYIC SVDDCHSSYR RKDHLNRHLL QHQGKLFKCP IENCNREFGF QGNMTRHVNE 180 LHSEDSPSTN GGAQKQHVCK EIGCGKVFRF ASRLRKHEDS HVKLDTVEAF CSEPGCMKHF 240 TNEQCLQAHI HSCHQHTTCE ICGSKQLRNN IKRHLLTHED KHSIERMKCD YKGCHHTFTT 300 KSNLAKHVKA VHLEHKPFVC SFSGCGLRFA YKHVRDNHEK TGCHVYTQGD FEEADEQFRL 360 RPRGGRKREC PDIPMLVRKR VTPPNQLGQE SEYMSWLHSQ EDNDEQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72050.2 | 1e-150 | C2H2 family protein |