PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g582410.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 526aa MW: 58388.3 Da PI: 9.1253

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g582410.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47	5.8e-15	271	318	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT++Ede+l ++++ +G+g W++ +++ g++R++k+c+ rw +yl Pd.00g582410.m01 271 RGAWTAQEDEILSNYINTYGKGKWRLLPQRAGLKRSGKSCRMRWVNYL 318 89********************************************97 PP
2	Myb_DNA-binding	51.1	3.1e-16	324	369	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ +++E++l+v+++k+lG++ W++Ia +++ gRt++++k++w+++l Pd.00g582410.m01 324 RGNISADEEDLIVRLHKLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 369 7899****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 526 aa Download sequence
MSLTARASGT LFSPQFSRTF SSLKLTLLRF SKPSPSRFTP KINMSSSAAA AQPIVEHVVL 60 FKVKDDTDPS KVNAMVNGLN GLASLNLTLH LTAGPLYRTR SSPIAFTHLL HSRYSTKDDL 120 STYTVHPNHL SVVKDSVLPI CDDVMAVDWV AEDVQGPVAP PPGSAIRVSF LKLKENLGEE 180 SKSEILGVIK GIKGKFAEIN QISTGENFSP ARAKGYSIAS LAVLPGVSEL EGLDSKQELA 240 NAEKDKVREH LESVIVLDYV VASPQSARIN RGAWTAQEDE ILSNYINTYG KGKWRLLPQR 300 AGLKRSGKSC RMRWVNYLRP GIKRGNISAD EEDLIVRLHK LLGNRWSLIA GRIPGRTDNE 360 IKNYWNTHLS RRSSPDQQLL QHHPSVNPKN QHNEKGLIPS DQSHKAKAIR PKHFKCTKVD 420 VGIPSHLQDD QDHQIMVDTT NNISSVSSSV PAGASSNDLF ILDLLNSTEF QQAQMKAWQV 480 AMVENYWRGS PIIADVDPFE PHIDGEVAFN ALSSFMNIEE YQYWIN

Sequence ? help Back to Top

Protein Sequence Length: 526 aa Download sequence

MSLTARASGT LFSPQFSRTF SSLKLTLLRF SKPSPSRFTP KINMSSSAAA AQPIVEHVVL  60
FKVKDDTDPS KVNAMVNGLN GLASLNLTLH LTAGPLYRTR SSPIAFTHLL HSRYSTKDDL  120
STYTVHPNHL SVVKDSVLPI CDDVMAVDWV AEDVQGPVAP PPGSAIRVSF LKLKENLGEE  180
SKSEILGVIK GIKGKFAEIN QISTGENFSP ARAKGYSIAS LAVLPGVSEL EGLDSKQELA  240
NAEKDKVREH LESVIVLDYV VASPQSARIN RGAWTAQEDE ILSNYINTYG KGKWRLLPQR  300
AGLKRSGKSC RMRWVNYLRP GIKRGNISAD EEDLIVRLHK LLGNRWSLIA GRIPGRTDNE  360
IKNYWNTHLS RRSSPDQQLL QHHPSVNPKN QHNEKGLIPS DQSHKAKAIR PKHFKCTKVD  420
VGIPSHLQDD QDHQIMVDTT NNISSVSSSV PAGASSNDLF ILDLLNSTEF QQAQMKAWQV  480
AMVENYWRGS PIIADVDPFE PHIDGEVAFN ALSSFMNIEE YQYWIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	9e-55	MYB family protein