PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g582400.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 269aa    MW: 30315.6 Da    PI: 4.8672
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g582400.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.99.9e-183882147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      rg+ ++eE+el+v+++k+lG++ W++Ia +++ gRt++++k++w++ 
  Pd.00g582400.m01 38 RGNISPEEEELIVRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTN 82
                      7899******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MVHELISFEG TLVRRGLNRC GKSCRLRWLN YLRPDIKRGN ISPEEEELIV RLHKLLGNRW  60
SLIAGRLPGR TDNEIKNYWN TNLSKRSEQG SDKAHQDQRS ASTSSKDDTK KSNNPASKSP  120
VQVVRTKAFK CRKVAIPSHL DGHDQMLERS NVAPGSDSES LCSSAVQEHD SSFGFLRDFD  180
INDMLIPDVL SSDFQQAQIN NCDQDMLECG ITKIEDLLMG EARLGEWRAD DDDQGDPIQP  240
NDDDHGDVNG FNALSSFLNS IDDDQWIIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35550.11e-41MYB family protein