PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g573140.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TCP

Protein Properties

Length: 266aa MW: 28112.4 Da PI: 9.5876

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g573140.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	127.6	1.3e-39	27	112	2	87
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsss 87 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tgt++++as+ +a+ s+s++ s Pd.00g573140.m01 27 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALTAAGGSVSQQGTSL 112 789******************************************************************99955555555543333 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MSENKPAEIK DFQIVIADKE EGKKQLAPKR SSNKDRHTKV EGRGRRIRMP ALCAARIFQL 60 TRELGHKSDG ETIQWLLQQA EPSIIAATGT GTIPASALTA AGGSVSQQGT SLSAGLHQKI 120 DELGGSSIGS GSRTSWAMVG GNLGRPHVAT GLWPPVSSFG FQSSSGPSTT NLGSESSNYM 180 QKIGFPGFDL PVSNMGPMSF TSILGGGSNQ QLPGLELGLS QDGHIGVLNS QALSQIYQQM 240 GHARVHQHQH QHQQPPAKDD SQGSGQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	4e-78	TCP family protein