PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g565710.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 245aa MW: 27008.2 Da PI: 9.4622 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36.9 | 6.6e-12 | 135 | 181 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr+++P+ K++ ++ L Av YI++L+ Pd.00g565710.m01 135 NHVEAERQRREKLNHRFYLLRSVVPNV-----SKMDRSSLLADAVAYINQLK 181 799***********************6.....5*****************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MHGIQTLVCI ATPYGVLELA SLDVIKEDWG FVHLSKSLFG SDNNNNNRVS QQKGGREGNV 60 LAPLLENGIF SGSQKKLTRQ AGTKEAARFN IGGSSPESLS GSVGNFTCEN TENTRSKKRR 120 RSSNNGASRE SSLLNHVEAE RQRREKLNHR FYLLRSVVPN VSKMDRSSLL ADAVAYINQL 180 KAKVEELELK TQAQPQNPKR VSVNNLDNQC SQSTSSIVDH HSSYNNTEVV PVEVDVKIMG 240 SEAII |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00870.1 | 2e-29 | bHLH family protein |