PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g554640.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 596aa MW: 65898.7 Da PI: 8.4689

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g554640.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.7	7.1e-15	102	146	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT eE+ ++++a k++G W +I +++g ++t q++s+ qk+ Pd.00g554640.m01 102 RERWTHEEHNKFLEALKLYGRA-WQRIEEHIG-TKTTVQIRSHAQKF 146 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 596 aa Download sequence
MAGLRLRWFP QPNSMPLYTL SVEFVRLPSI FEPFPSTNEN YAFSGECPAS YWSLSHNPSS 60 SRKLSIRHGF LRSCFLLVME PHSSREDLAI KARKPYTITK QRERWTHEEH NKFLEALKLY 120 GRAWQRIEEH IGTKTTVQIR SHAQKFFSKT DKKLFHYQLE KEAHVNGVPI GQSIGIDIPP 180 PRPKRKPCNP YPRKSSSAAS TCATLHVGAK VGKLLSSASS SCYKQIVDLE KEPLHERPFG 240 EEKANNAENQ VANWAEVFTL LQDGHCSSVS SANNNSIPSQ VALGNACTLR DATNESYATI 300 KLKGNQNLKK IDAKMIVGDN GTSGAPKSGN INNAFHKELV QGEKFSSLIV SSLLQNPAAH 360 AVASSTAAFW PYTNAKNRKD PPNMAAIAAA TVTAATAWSA VHRLLPRQTD FSCSPISVTG 420 VPVPSMDTGQ APPANREKGV SSLQIPSLQD QQLDSRHTEA VEAQHSNIAK ANTDDEKEVA 480 STEEVHDSNH AKSRKQVDRS SYGSNTPSDS EDETAAIEKN EKGKEELKEP NTSHPAAESS 540 QRRSRCVSNM YDSWKEVSEE GRLAFHALFS RDVLPQSFSL TQDLKIKGHQ NDGMED

Sequence ? help Back to Top

Protein Sequence Length: 596 aa Download sequence

MAGLRLRWFP QPNSMPLYTL SVEFVRLPSI FEPFPSTNEN YAFSGECPAS YWSLSHNPSS  60
SRKLSIRHGF LRSCFLLVME PHSSREDLAI KARKPYTITK QRERWTHEEH NKFLEALKLY  120
GRAWQRIEEH IGTKTTVQIR SHAQKFFSKT DKKLFHYQLE KEAHVNGVPI GQSIGIDIPP  180
PRPKRKPCNP YPRKSSSAAS TCATLHVGAK VGKLLSSASS SCYKQIVDLE KEPLHERPFG  240
EEKANNAENQ VANWAEVFTL LQDGHCSSVS SANNNSIPSQ VALGNACTLR DATNESYATI  300
KLKGNQNLKK IDAKMIVGDN GTSGAPKSGN INNAFHKELV QGEKFSSLIV SSLLQNPAAH  360
AVASSTAAFW PYTNAKNRKD PPNMAAIAAA TVTAATAWSA VHRLLPRQTD FSCSPISVTG  420
VPVPSMDTGQ APPANREKGV SSLQIPSLQD QQLDSRHTEA VEAQHSNIAK ANTDDEKEVA  480
STEEVHDSNH AKSRKQVDRS SYGSNTPSDS EDETAAIEKN EKGKEELKEP NTSHPAAESS  540
QRRSRCVSNM YDSWKEVSEE GRLAFHALFS RDVLPQSFSL TQDLKIKGHQ NDGMED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46830.1	1e-65	MYB_related family protein