PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g554600.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 558aa MW: 61542 Da PI: 9.1377

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g554600.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.9	6.5e-15	90	134	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT eE+ ++++a k++G W +I +++g ++t q++s+ qk+ Pd.00g554600.m01 90 RERWTHEEHNKFLEALKLYGRA-WQRIEEHIG-TKTTVQIRSHAQKF 134 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 558 aa Download sequence
MAGLRLRWFP QPNSMPLYTL SVEFVRLPSI FEPFPSTNEN YAFSGECPAS YWSLSHNPSS 60 SRKLSIRHGF LRREDLAIKA RKPYTITKQR ERWTHEEHNK FLEALKLYGR AWQRIEEHIG 120 TKTTVQIRSH AQKFFSKLEK EAHVNGVPIG QSIGIDIPPP RPKRKPCNPY PRKSSSAAST 180 CATLHVGAKV GKLLSSASSS CYKQVVDLEK EPLHERPFGE EKANNAENQV ANWAEVVTLL 240 QDGHCSSVSS ANNNSIPSQV ALGNACTLRD ATNESHVTIK LKGNQNLKKI DSKMIVGDNG 300 TSGAPKSGNT NNAFHKELVQ GEKFSSLIVS SLLQNPAAHA VASSTAAFWP YANAKNRKDP 360 PSMAAIAAAT VTAATAWSAV HRLLPRQTDF SCSPISMTGV PVPSMDTGQA PPAKREKGES 420 SLQIPSLQDQ QLDSRHTEAV EAQHSNIAKA NTDDEKEVAS TEEVHDSNHA KSRKQTAAIE 480 KNEKGKEELK EPNTSHPAAE SSQRRSRCVS NMYDSWKEVS EEGRLAFHAL FSRDVLPQSF 540 SLTQDLKIKG HQNDGMED

Sequence ? help Back to Top

Protein Sequence Length: 558 aa Download sequence

MAGLRLRWFP QPNSMPLYTL SVEFVRLPSI FEPFPSTNEN YAFSGECPAS YWSLSHNPSS  60
SRKLSIRHGF LRREDLAIKA RKPYTITKQR ERWTHEEHNK FLEALKLYGR AWQRIEEHIG  120
TKTTVQIRSH AQKFFSKLEK EAHVNGVPIG QSIGIDIPPP RPKRKPCNPY PRKSSSAAST  180
CATLHVGAKV GKLLSSASSS CYKQVVDLEK EPLHERPFGE EKANNAENQV ANWAEVVTLL  240
QDGHCSSVSS ANNNSIPSQV ALGNACTLRD ATNESHVTIK LKGNQNLKKI DSKMIVGDNG  300
TSGAPKSGNT NNAFHKELVQ GEKFSSLIVS SLLQNPAAHA VASSTAAFWP YANAKNRKDP  360
PSMAAIAAAT VTAATAWSAV HRLLPRQTDF SCSPISMTGV PVPSMDTGQA PPAKREKGES  420
SLQIPSLQDQ QLDSRHTEAV EAQHSNIAKA NTDDEKEVAS TEEVHDSNHA KSRKQTAAIE  480
KNEKGKEELK EPNTSHPAAE SSQRRSRCVS NMYDSWKEVS EEGRLAFHAL FSRDVLPQSF  540
SLTQDLKIKG HQNDGMED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46830.1	3e-53	MYB_related family protein