PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g546120.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 295aa    MW: 33850.8 Da    PI: 4.5186
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g546120.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM74.72.2e-2361371128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvka..eekewyfFskrdkkyatgkrknratk...sgyW 83 
                       +p+G+rF P++eel+ +yL ++v+g++ +   v++++d+y + ePw++ +    +  +  +++++y F++ +kk+++g+r  r++    +g+W
  Pd.00g546120.m01   6 VPVGYRFTPSEEELLLHYLLPRVNGNDYPK-GVVPDCDLYGTkEPWEIWRdfhhS--SpdDQEDIYVFTTLKKKTPNGSRFCRTVGaagTGVW 95 
                       599************************999.99*******9879****7423322..24355688******************643344999* PP

               NAM  84 katgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       k   + k++ +  g+++g++k + + +  +p+    +W+m e++l
  Pd.00g546120.m01  96 KGEDSGKKIRA-CGNDIGIRKRFRYMNPGSPH--DDRWIMLEFQL 137
                       **********9.999***********655555..89*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MGGYQVPVGY RFTPSEEELL LHYLLPRVNG NDYPKGVVPD CDLYGTKEPW EIWRDFHHSS  60
PDDQEDIYVF TTLKKKTPNG SRFCRTVGAA GTGVWKGEDS GKKIRACGND IGIRKRFRYM  120
NPGSPHDDRW IMLEFQLDES LVRVRNKETI VLCLVRKKET SSKSKLEERQ NHEVDMASRG  180
EILAQHVHDD QQQHIDASTY DELRFLDDYL MNDVGGEQNT MVNPSLLAQY DQQDMIGTST  240
EDQLKVLEDF LMNDVGGEQD IMVNPTLLAQ YGQQGTSIED QLRLFEDYLM SDIEG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61910.18e-21NAC family protein