PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g545230.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HSF | ||||||||
Protein Properties | Length: 230aa MW: 25359.9 Da PI: 3.7085 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 85.7 | 6.3e-27 | 21 | 120 | 2 | 87 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTT..........X....TTSEE CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekksks..........k....ekiwe 80 Fl+k+y++++d++++ ++sws+ +nsfvv++ ef++++LpkyFkh+nf+SFvRQLn+Y + ++++ ++ ++ + e+++e Pd.00g545230.m01 21 FLNKTYDMVDDPSTNAVVSWSNGNNSFVVWNVPEFSRDLLPKYFKHNNFSSFVRQLNTYVAQVLEENMHNFQEdavmpestqmQggvpESTVE 113 9**********************************************************9888877766644445555544431334455555 PP EEESXXX CS HSF_DNA-bind 81 FkhksFk 87 + +F Pd.00g545230.m01 114 IPNANFM 120 5555555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MEGVEDAATM INLANTPPPP FLNKTYDMVD DPSTNAVVSW SNGNNSFVVW NVPEFSRDLL 60 PKYFKHNNFS SFVRQLNTYV AQVLEENMHN FQEDAVMPES TQMQGGVPES TVEIPNANFM 120 SSETGNAEYM DMSAVLDGTL PTETDAFSPE PDVDALLGSS LPGITDIFWE QFLPASPLTG 180 DVDEINLSST DGGTTDQELK LTEENGWDKT QHMNHITEQM ELLAPGSRIG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17750.1 | 9e-35 | HSF family protein |