PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g540090.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 227aa    MW: 25714.2 Da    PI: 4.4093
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g540090.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.83.9e-113341346
                      HHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding 13 vdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                      +++ +q+G++ W++Ia +++ gRt++++k++w +
  Pd.00g540090.m01  3 IQLQAQFGNK-WAKIATYLP-GRTDNDVKNFWST 34
                      78999*****.*********.***********65 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MVIQLQAQFG NKWAKIATYL PGRTDNDVKN FWSTRRKRFE RILQKSTSLN NRGKSPLVRH  60
ELPEVKVPPD PCSSAIEEGT SCCNYETHNC FSNSQEFRMV PLPDLVKPIL QNVEAEQPIL  120
EATPLNMISL IDSPPHYSLS QLPQPQLDLP FLSECKELDQ DPMAPDPLDM FGQEVTECES  180
GQKFFRENAA SIKLGEVKDL SIPNIVFDDF PPEMLDYLET LASSSEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60460.12e-19MYB family protein