PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g531130.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | GATA | ||||||||
Protein Properties | Length: 339aa MW: 36860.7 Da PI: 6.255 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 55.2 | 9.4e-18 | 267 | 301 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +C t kTp+WR gp g+ktLCnaCG++y++ +l Pd.00g531130.m01 267 CLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 301 99*****************************9885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 339 aa Download sequence |
MEAPEYFQNS FCPQFTPEKR HSFDNNNNKA TNGAGGGGDH FMVEDLLDFS NDDAVITDGG 60 ATFDNVTGNS TDSSTLTVID SCNSSSLSCS EPNVIPDIGS RNIAEGPFSS DLCVPYDDLA 120 ELEWLSNFVE ESFSSEDLQK LQLISGMKAR PDEAASDTRQ FQPERNRNDN AHNTTTTNNN 180 PIFNPDVSVP AKARSKRSRA APCNWTSRLL LLSQPTSSSE QSDVVSSGPA SPLPPPSTTG 240 KKTVKSAPKK KESPEGPGGG QGEGRKCLHC ATDKTPQWRT GPMGPKTLCN ACGVRYKSGR 300 LVPEYRPASS PTFVLTKHSN SHRKVLELRR QKEMDPRQC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32890.1 | 8e-67 | GATA family protein |