PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g529110.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TCP

Protein Properties

Length: 306aa MW: 32119.2 Da PI: 6.7556

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g529110.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	88.8	1.2e-27	1	108	24	112
TCP 24 lsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........................... 88 ++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s + Pd.00g529110.m01 1 MPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSMSVPsqlrssyyspnfsvhqnqrrslfqgig 93 9**********************************************9998777777777765665444445555555555555333333333 PP TCP 89 ..kaaksaakskksqksaasalnlak 112 + ++s+++ ln++ Pd.00g529110.m01 94 lsS-----------SDSSSTLLNFQT 108 331...........333333333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence
MPALCAARVF QLTRELGHKS DGETIEWLLQ QAEPAVIAAT GTGTIPANFT SLNISLRSSG 60 SSMSVPSQLR SSYYSPNFSV HQNQRRSLFQ GIGLSSSDSS STLLNFQTNS MHASMLQAKQ 120 ELRDTVSLDL SETASGEGSM GGRKRRPPEQ DLNQMGGGGG GGGGGYLLQS STGAVPASHH 180 HSQIPANFWM VANSNNQVMS GDPIWTFPAS VNNSGLYRGT MSGGLHFMNF PAPMTLLPSQ 240 QQLGGSGGGG GGNDGDNMSD GQLNMLAGLN PYRHMSSTGV SESQQASGSH SHHGGDDRHD 300 STSHHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	9e-38	TCP family protein