PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g528880.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Nin-like
Protein Properties Length: 339aa    MW: 38996.9 Da    PI: 4.6051
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g528880.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK83.91.5e-26169219252
            RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                       +k +s e++s+yF++pi++AAkeL+v+lT+LK++CR++GI+RWPhRk++sl
  Pd.00g528880.m01 169 SKMLSRETISNYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRKLASL 219
                       57899*******************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MGGHSLMSWL ANYDVVEDPF CFTNQIVPPM DYLSGMNGYA PFDWQYEWTL PLVQDSFHDA  60
AVPFMDQSCL NLDPLYSSLD IQPIRSVFQD DEIVLGNGNG VCNDLFGELM EPSNNQQKQI  120
QHQPPLLMCK NEENGSAENE LEEETKVISK RSHLSTRLRS SNSTSLNSSK MLSRETISNY  180
FYMPITQAAK ELNVGLTLLK KRCRELGIRR WPHRKLASLQ TLIRNIQELG KEGEESEEKL  240
RNAIELLERE RKLLEEVPDM QLEDNTKRLR QACFKANYKK RKIMGMNNMD QSQSSFICSN  300
NEIHEYASIM DDGYEEDEEI KSLLSDSFSS SNSNNICLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.16e-40Nin-like family protein