PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g517300.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CPP

Protein Properties

Length: 959aa MW: 105186 Da PI: 6.8239

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g517300.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	51.3	2.3e-16	527	564	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+CnCkk+kClk+YC+Cfaag++C+e+C C++C+N + Pd.00g517300.m02 527 TKRCNCKKTKCLKLYCDCFAAGVYCAESCACQGCFNIT 564 699*********************************76 PP
2	TCR	50.2	5e-16	604	642	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks ClkkYCeC++a++ Cs+ C+C++CkN Pd.00g517300.m02 604 RHKRGCNCKKSMCLKKYCECYQANVGCSSGCRCDGCKNV 642 589***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 959 aa Download sequence
MDSPEIRKIK ANTTSSSDSP PVQDSPVFSY INNLSPIQPV KASHLAQGFP GLNSPPLVFT 60 SPRINSHRDT SFLKRPQYQP LSSAEKCKTQ DEAKKFLDGP VDPKISQLHM RLITDSQDCE 120 TKICVESQQC SSSEGVDEYL ADPSEVDCVD STQSASPCLK QSNNVPETFT GSKETTLYDN 180 KHNTRTDLGT EAKAQSEQAK EDLEGKQTFD AKPVNIIEQS DGELPYDECP NIESGLSVNN 240 AYKREYRQHL HDQLQDRGGK HEDDCDHTPQ SPPGRLQIVQ VYENSAENVG AISKGMIGNM 300 ILHAPKARSE QGGMHRRCLQ FEEAPPCATG KRDCSLSSIQ EVNYSEPPSG TGESKLVKLS 360 YADLKATSKR QMGTPLPPRF GGNSPSTVPK PSGIGLHLNS IVNAAPLVRG TTRSIKLADH 420 YIGVQVMKSA SVMSSHLPDN VRCRSILLNM VEKDSAGPED RDESETSIAE SSAVPQSPHT 480 VVFEHHGPTH EKRGLDAENV DDYEECKQSS PKKKRKKTSS TKDSDGTKRC NCKKTKCLKL 540 YCDCFAAGVY CAESCACQGC FNITDYEDTV LETRQHIESR NPLAFAPKIV QHEEEVQFTP 600 SSARHKRGCN CKKSMCLKKY CECYQANVGC SSGCRCDGCK NVYGRKGEYI PIEHGVGKDN 660 VSDKAGKERI ESTFDEKLEM VATKKDILST ELYDSHNLTP LAPSFQCSDH ENNVPKSPCL 720 PTSYLPSPES DLTIISSYEK STRSPLRHSE SSDILLETSK ELSDLGSYNW RVDYDNIGIA 780 DTFSPRCDAA PTTCHITPMS DLCSMAMVSS ASSKTIDWTN ASQVQLCPGS HSLSSDSSLH 840 RRSSPVTPMT RLGGTKSCQG LDFENGLYDI LQDDTPEILK DSSTPIRSLK VSSPNKKRVS 900 PPHSHNHELG ASSSGALRSG RKFILKAVPS FPPLTPCIGS KGSSIIQNMS NLQDKGRKK

Sequence ? help Back to Top

Protein Sequence Length: 959 aa Download sequence

MDSPEIRKIK ANTTSSSDSP PVQDSPVFSY INNLSPIQPV KASHLAQGFP GLNSPPLVFT  60
SPRINSHRDT SFLKRPQYQP LSSAEKCKTQ DEAKKFLDGP VDPKISQLHM RLITDSQDCE  120
TKICVESQQC SSSEGVDEYL ADPSEVDCVD STQSASPCLK QSNNVPETFT GSKETTLYDN  180
KHNTRTDLGT EAKAQSEQAK EDLEGKQTFD AKPVNIIEQS DGELPYDECP NIESGLSVNN  240
AYKREYRQHL HDQLQDRGGK HEDDCDHTPQ SPPGRLQIVQ VYENSAENVG AISKGMIGNM  300
ILHAPKARSE QGGMHRRCLQ FEEAPPCATG KRDCSLSSIQ EVNYSEPPSG TGESKLVKLS  360
YADLKATSKR QMGTPLPPRF GGNSPSTVPK PSGIGLHLNS IVNAAPLVRG TTRSIKLADH  420
YIGVQVMKSA SVMSSHLPDN VRCRSILLNM VEKDSAGPED RDESETSIAE SSAVPQSPHT  480
VVFEHHGPTH EKRGLDAENV DDYEECKQSS PKKKRKKTSS TKDSDGTKRC NCKKTKCLKL  540
YCDCFAAGVY CAESCACQGC FNITDYEDTV LETRQHIESR NPLAFAPKIV QHEEEVQFTP  600
SSARHKRGCN CKKSMCLKKY CECYQANVGC SSGCRCDGCK NVYGRKGEYI PIEHGVGKDN  660
VSDKAGKERI ESTFDEKLEM VATKKDILST ELYDSHNLTP LAPSFQCSDH ENNVPKSPCL  720
PTSYLPSPES DLTIISSYEK STRSPLRHSE SSDILLETSK ELSDLGSYNW RVDYDNIGIA  780
DTFSPRCDAA PTTCHITPMS DLCSMAMVSS ASSKTIDWTN ASQVQLCPGS HSLSSDSSLH  840
RRSSPVTPMT RLGGTKSCQG LDFENGLYDI LQDDTPEILK DSSTPIRSLK VSSPNKKRVS  900
PPHSHNHELG ASSSGALRSG RKFILKAVPS FPPLTPCIGS KGSSIIQNMS NLQDKGRKK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	513	517	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	6e-54	CPP family protein