PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g510660.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | TCP | ||||||||
Protein Properties | Length: 262aa MW: 27581.9 Da PI: 9.587 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 127.6 | 1.2e-39 | 27 | 112 | 2 | 87 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsss 87 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tgt++++as+ +a+ s+s++ s Pd.00g510660.m01 27 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALTAAGGSVSQQGTSL 112 789******************************************************************99955555555543333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
MSENKPAEIK DFQIVIADKE EGKKQLAPKR SSNKDRHTKV EGRGRRIRMP ALCAARIFQL 60 TRELGHKSDG ETIQWLLQQA EPSIIAATGT GTIPASALTA AGGSVSQQGT SLSAGLHQKI 120 DELGGSSIGS GSRTSWAMVG GNLGRPHVAT GLWPPVSSFG FQSSSGPSTT NLGSESSNYM 180 QKIGFPGFDL PVSNMGPMSF TSILGGGSNQ QLPGLELGLS QDGHIGVLNS QALSQIYQQM 240 GHARVHQHQQ PPAKDDSQGS GQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27010.1 | 4e-79 | TCP family protein |