PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g508820.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | C2H2 | ||||||||
Protein Properties | Length: 292aa MW: 31925.3 Da PI: 8.499 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.4 | 0.00049 | 226 | 248 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp Cg Fs+ +L+ H + H Pd.00g508820.m01 226 ECPQCGAKFSSVTTLVDHVEKiH 248 5*****************99888 PP | |||||||
2 | zf-C2H2 | 15.8 | 3.9e-05 | 265 | 286 | 3 | 23 |
ETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 CpdCgksFsrksnLkrHirt.H 23 Cp+C+k F+++ L+ H + H Pd.00g508820.m01 265 CPKCSKGFRDPVALVEHVERdH 286 *****************99888 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence |
MGTPEFPDLG RHCYVADCQQ IDFLPFTCDS CHQVFCLEHR SYIKHNCPKA DRQNVTVVIC 60 PLCAKGVHLI PDEDANITWE RHVNAECDPS NYEKATKKKK CPIPGCKELL TFSNTIKCRD 120 CTVDHCLKHR FGPDHKCPGP KKPTAGFPFS GLLSRSRKEV SKPNHAPAAS SSKWSNSFLT 180 AASSFRASAE ASVAKLSSEL SQKWQIAKDG AGQSSSSGSR NGQLEECPQC GAKFSSVTTL 240 VDHVEKIHVK GGNRAGVKKM TIDACPKCSK GFRDPVALVE HVERDHGGTS RA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41835.1 | 1e-121 | C2H2 family protein |