PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g507740.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 412aa MW: 47134.9 Da PI: 8.543

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g507740.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.1	5.5e-10	357	405	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 ++W+ E++ l +v+q+G g+Wk+I + Rt ++k++w+++ Pd.00g507740.m01 357 NKWSSLEEDTLRAGVEQYGVGRWKLILTSNQdifGERTQVDLKDKWRNL 405 58******************************99*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MDPATEETPH IAKSENLGVF MRIRPEWQVY DGFSQVFSPD SSQEEVYEKM MKPLVEVFLK 60 GKSGMLAAFG PGGSGKTHTI FGCNKQPGGG HLIFHCKHRI MSLFISIFEI RCEGGKDERV 120 FDLSPNGVDL TMHRSTLKGL HEGINQIPSH KSNGEVNDQA NDGVLSIVDL AGAEREKRTG 180 NQGVRLLESN FINKTSVVFC LCLRVCSLKS LSEHQKNPLK PLEKHFQDSL LTKYLRAYME 240 GNKRMALILT VKAGGEDYHN TSCLLKQSSL YMEIKFNNEP SKRRLSPSFV LKGYKEKLEV 300 AEEIQRLRES NLELENEVKD LKSLVEVQRS GDVQPKKECY FPIEEDKERL ARRRKVNKWS 360 SLEEDTLRAG VEQYGVGRWK LILTSNQDIF GERTQVDLKD KWRNLIRWNM HQ

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MDPATEETPH IAKSENLGVF MRIRPEWQVY DGFSQVFSPD SSQEEVYEKM MKPLVEVFLK  60
GKSGMLAAFG PGGSGKTHTI FGCNKQPGGG HLIFHCKHRI MSLFISIFEI RCEGGKDERV  120
FDLSPNGVDL TMHRSTLKGL HEGINQIPSH KSNGEVNDQA NDGVLSIVDL AGAEREKRTG  180
NQGVRLLESN FINKTSVVFC LCLRVCSLKS LSEHQKNPLK PLEKHFQDSL LTKYLRAYME  240
GNKRMALILT VKAGGEDYHN TSCLLKQSSL YMEIKFNNEP SKRRLSPSFV LKGYKEKLEV  300
AEEIQRLRES NLELENEVKD LKSLVEVQRS GDVQPKKECY FPIEEDKERL ARRRKVNKWS  360
SLEEDTLRAG VEQYGVGRWK LILTSNQDIF GERTQVDLKD KWRNLIRWNM HQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58340.2	2e-09	MYB_related family protein