PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g506580.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CAMTA

Protein Properties

Length: 1010aa MW: 113232 Da PI: 6.8661

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g506580.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	176.3	3.9e-55	20	135	3	117
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptf 94 +e k+rwl++ ei++iL nf+++elt++++ rp+ gsl+L++rk +ryfrkDG+ w+kkkdgktv+E+hekLK g+v+vl+cyYah+e+n++f Pd.00g506580.m01 20 QEaKERWLRPAEICEILRNFQNFELTADPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKTVKEAHEKLKAGSVDVLHCYYAHGEDNSNF 112 5559*************************************************************************************** PP CG-1 95 qrrcywlLeeelekivlvhylev 117 qrr+yw+L+++l++ivlvhy++v Pd.00g506580.m01 113 QRRSYWMLDMHLQHIVLVHYRNV 135 *******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1010 aa Download sequence
MADTRKYLPT QQLDLAQILQ EAKERWLRPA EICEILRNFQ NFELTADPPV RPPAGSLFLF 60 DRKALRYFRK DGHRWRKKKD GKTVKEAHEK LKAGSVDVLH CYYAHGEDNS NFQRRSYWML 120 DMHLQHIVLV HYRNVGEAYQ SGVPCLLADP GSQVASPQSV SAPFSAQANS PAPTGQTSFA 180 SSPNRVDWNG KTLSTEFEDV DSGGDAGTSS VAQSMFGSVL HNASLLSQVG GFPESFRDPL 240 SSWYAGPKFA HGAGSSVWNG MDSSTRKERS MHDQNLFVEE PNRADFITHK LTDVDCRVNN 300 VTCEDKLTTE IDVQVATASS KREAQVSKEH DFNVFHPQVQ DYSDPQVVVN SSNQVEENSR 360 DGGMRNAESV ELKKLDSFGR WMDKEIGVDC DDSLMASDSG NYWSPLDAEN GDKEVSSLSH 420 HMHLDIDSLG PSLSQEQLFS IHDFSPDWAY SETETKVLIV GSFLGSKKHT TETKWGCMFG 480 EIEVSAEVLS NNVIRCQTPL HAPGCVPFYV TCRNRLACSE VREFEYREKP IGNTSKDDEL 540 RFQIRLAKLL SLDSEMKWLE CTALDCDKCE LKSSIFSMRN NRESDWERID GASVACKSDH 600 LTHRDVLIQN LLKDRLCEWL VCKLHYGGKG PHVLDNEGQG VLHLTAALGY EWAMGPIIAS 660 GISPNFRDAR GRTGLHWASY FGREETVIAL LRLGAAPGAV EDPTSAFPGG QTAADLASSR 720 GHKGIAGYLA EADLTSHLET LTMNENIVNN VAATIAAEKA IETAEVIATD VVVDEQYSLK 780 SSMAAVRKSA HAAALIQEAF RTRSFRQRQL TKSGTDVSEV HSHDLIARRS LKRVQKFAHY 840 EDYLHVAAAL KIQQNYRGWK GRKDYLKIRD RIVKIQAHVR GHQVRKNYKK VVWSVGILEK 900 VILRWRRKGA GLRGFRVEKA IEDVSSEVKK NDDYEFLSVG RKQKYAGVEK ALSRVRSMSR 960 QPEAREQYMR LLSKFEKLKM ADGESPASNQ IESSDERVLD EVLLALTEGQ

Sequence ? help Back to Top

Protein Sequence Length: 1010 aa Download sequence

MADTRKYLPT QQLDLAQILQ EAKERWLRPA EICEILRNFQ NFELTADPPV RPPAGSLFLF  60
DRKALRYFRK DGHRWRKKKD GKTVKEAHEK LKAGSVDVLH CYYAHGEDNS NFQRRSYWML  120
DMHLQHIVLV HYRNVGEAYQ SGVPCLLADP GSQVASPQSV SAPFSAQANS PAPTGQTSFA  180
SSPNRVDWNG KTLSTEFEDV DSGGDAGTSS VAQSMFGSVL HNASLLSQVG GFPESFRDPL  240
SSWYAGPKFA HGAGSSVWNG MDSSTRKERS MHDQNLFVEE PNRADFITHK LTDVDCRVNN  300
VTCEDKLTTE IDVQVATASS KREAQVSKEH DFNVFHPQVQ DYSDPQVVVN SSNQVEENSR  360
DGGMRNAESV ELKKLDSFGR WMDKEIGVDC DDSLMASDSG NYWSPLDAEN GDKEVSSLSH  420
HMHLDIDSLG PSLSQEQLFS IHDFSPDWAY SETETKVLIV GSFLGSKKHT TETKWGCMFG  480
EIEVSAEVLS NNVIRCQTPL HAPGCVPFYV TCRNRLACSE VREFEYREKP IGNTSKDDEL  540
RFQIRLAKLL SLDSEMKWLE CTALDCDKCE LKSSIFSMRN NRESDWERID GASVACKSDH  600
LTHRDVLIQN LLKDRLCEWL VCKLHYGGKG PHVLDNEGQG VLHLTAALGY EWAMGPIIAS  660
GISPNFRDAR GRTGLHWASY FGREETVIAL LRLGAAPGAV EDPTSAFPGG QTAADLASSR  720
GHKGIAGYLA EADLTSHLET LTMNENIVNN VAATIAAEKA IETAEVIATD VVVDEQYSLK  780
SSMAAVRKSA HAAALIQEAF RTRSFRQRQL TKSGTDVSEV HSHDLIARRS LKRVQKFAHY  840
EDYLHVAAAL KIQQNYRGWK GRKDYLKIRD RIVKIQAHVR GHQVRKNYKK VVWSVGILEK  900
VILRWRRKGA GLRGFRVEKA IEDVSSEVKK NDDYEFLSVG RKQKYAGVEK ALSRVRSMSR  960
QPEAREQYMR LLSKFEKLKM ADGESPASNQ IESSDERVLD EVLLALTEGQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09410.1	0.0	CAMTA family protein