PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g501300.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 946aa MW: 104768 Da PI: 7.6349

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g501300.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.1	3.5e-07	259	301	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT +E+e + a +q G++ +++I +++ + q++++++ + Pd.00g501300.m01 259 AWTHQEEESFFAALRQVGKN-FEKITCRVQ-SKNKDQVRHYYYRL 301 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 946 aa Download sequence
MAGNGMFLLG MAKTRKDLNF LGLEINKKLV KRCLDSVHWR GIRNGYFIAT NATSTFRFII 60 SSYPVLVSIQ CPNPDFNEPD HRWSMLQRSL VEAVADLLTA NGKVFLQSDI EAVSLRMKEQ 120 FQRYGKGKLT VVHEQSFAIT NSGWLKDNPF GVQSDWEQHV LARGDPIRLS EDSIRFLFAF 180 LQSQELVRSI LGFSGFFEIS ISLVCTKLEI GSTVIVNSEA HPHQGGFFVQ DGGPGLATST 240 SNHVALQQPV KKPTRQWAAW THQEEESFFA ALRQVGKNFE KITCRVQSKN KDQVRHYYYR 300 LVRRMNKLLG PGLYLDSKNS KDTNAAMLRW WSLLEKYSCK ASKLHLKPRR FKIFIEALEH 360 QLLKDRKKSV RKRPSQGENC PPNAPSTLSN QNRPSGHDNR TVKLVLVDSH NIQKLGPGKA 420 SLKRNVNIGV NRSNKGDSST MKPARQRRKP GALSSAAYKK WEKAAIAGVS LVADAAEHLE 480 RAITDKEVEQ DRSAAGQSST VPVGKVLPPM PAFVQNIDAE SGINNCMKLK LQLFPIDDGT 540 RRALENDKHN PYLELTLSTR KKISSVLDHL NRKWGNSNVA SGELTLFHYS VQRDNLMGYP 600 RWTQDSIVSA ADVYATIGCP PVFRLRYGWF SNTELGSVGL QTPVASCSNQ AEEPNEINGY 660 ICASPNNNFV GDPTEITSWH KKEAGDQSTS RHRGDVDDLR SITGTALSAG VWADSLTNIS 720 MGDLLSGVSH DLDTNCIDPP VAEGSQCLQQ IPFSCDSFDA VIAAHISRQN KMGCQATMEC 780 HVSSIWDAEE TCDAFSFQKN SVFCQEVSSL SAVAPPGASS AGSDCMVEEI PVVERPIDDP 840 PQGGPTDECQ SDPRILESSV KDFNALTDIY WPESLGPLDL EMPSSKYHSE DFVLSDSLSG 900 LNRLIASSLD AFQNCSFFGA NKREPTASVE ARETASFSDF KIGNGV

Sequence ? help Back to Top

Protein Sequence Length: 946 aa Download sequence

MAGNGMFLLG MAKTRKDLNF LGLEINKKLV KRCLDSVHWR GIRNGYFIAT NATSTFRFII  60
SSYPVLVSIQ CPNPDFNEPD HRWSMLQRSL VEAVADLLTA NGKVFLQSDI EAVSLRMKEQ  120
FQRYGKGKLT VVHEQSFAIT NSGWLKDNPF GVQSDWEQHV LARGDPIRLS EDSIRFLFAF  180
LQSQELVRSI LGFSGFFEIS ISLVCTKLEI GSTVIVNSEA HPHQGGFFVQ DGGPGLATST  240
SNHVALQQPV KKPTRQWAAW THQEEESFFA ALRQVGKNFE KITCRVQSKN KDQVRHYYYR  300
LVRRMNKLLG PGLYLDSKNS KDTNAAMLRW WSLLEKYSCK ASKLHLKPRR FKIFIEALEH  360
QLLKDRKKSV RKRPSQGENC PPNAPSTLSN QNRPSGHDNR TVKLVLVDSH NIQKLGPGKA  420
SLKRNVNIGV NRSNKGDSST MKPARQRRKP GALSSAAYKK WEKAAIAGVS LVADAAEHLE  480
RAITDKEVEQ DRSAAGQSST VPVGKVLPPM PAFVQNIDAE SGINNCMKLK LQLFPIDDGT  540
RRALENDKHN PYLELTLSTR KKISSVLDHL NRKWGNSNVA SGELTLFHYS VQRDNLMGYP  600
RWTQDSIVSA ADVYATIGCP PVFRLRYGWF SNTELGSVGL QTPVASCSNQ AEEPNEINGY  660
ICASPNNNFV GDPTEITSWH KKEAGDQSTS RHRGDVDDLR SITGTALSAG VWADSLTNIS  720
MGDLLSGVSH DLDTNCIDPP VAEGSQCLQQ IPFSCDSFDA VIAAHISRQN KMGCQATMEC  780
HVSSIWDAEE TCDAFSFQKN SVFCQEVSSL SAVAPPGASS AGSDCMVEEI PVVERPIDDP  840
PQGGPTDECQ SDPRILESSV KDFNALTDIY WPESLGPLDL EMPSSKYHSE DFVLSDSLSG  900
LNRLIASSLD AFQNCSFFGA NKREPTASVE ARETASFSDF KIGNGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.3	0.0	MYB_related family protein