PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g496410.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 650aa MW: 74358 Da PI: 8.6927

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g496410.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.4	3.9e-09	593	637	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 W++ + lv+a k ++++ +W+++a+ ++ g+t +qck ++ Pd.00g496410.m01 593 VWSAVQERALVQALKTFPKEasqRWERVAAAVP-GKTVNQCKKKFT 637 6******************************.*******986 PP

Sequence ? help Back to Top
Protein Sequence Length: 650 aa Download sequence
MNVQSKFRLI SYSQELVDGQ PVYVTSNCLP VKALKLEPAG HSFHAVALKL LGCVEEEKDA 60 DVQKVVNDKE PTSIPSFDSY SSKGKKKSGA EGKQQDHYAL LGLSHLRYLA TEEQIRKSYR 120 ETALKYHPDK QAALLLNEET EAAKQTKKDE IESHFKSIQE AYEALIDPVK RRIYDSTDEF 180 DDEIPTDCAP QDFFKVFGPA FMRNGRWSVN QPIPFLGDEN TPLKEADSFY DFWYTFKSWR 240 EFPHTDEFDL EQAESRDHKR WMERQNAKLS EKARKEEYAR IRTLVDNAYK RDPRIVRRKE 300 AEKAEKQRKK EAKYLAKKLQ EEEAARAVEE EKRRKEEEEK RAAEIALQQK KLKEKEKKLL 360 RKERSRLRTL SGPVISNRLL SLAEDDVESL CMSLDIEQLR NICERMEGKE GLERAEVLRD 420 ACGYKNDLEG KKEDEKKTLQ QNGSVGTNGT VLLGSYEKKE KPWSREEIEL LRKGMLKFPK 480 GTSRRWEVVS DYIGTGRSVE EILKATKTVL LQKPDSSKAF DSFLEKRKPT PSIASPLTTR 540 IEVEGVLTPP QGTETPAEKV DKSGESSSGS TKDQNPNDPI AENGVSSGSE QDVWSAVQER 600 ALVQALKTFP KEASQRWERV AAAVPGKTVN QCKKKFTLLK ESFRNKKSSA

Sequence ? help Back to Top

Protein Sequence Length: 650 aa Download sequence

MNVQSKFRLI SYSQELVDGQ PVYVTSNCLP VKALKLEPAG HSFHAVALKL LGCVEEEKDA  60
DVQKVVNDKE PTSIPSFDSY SSKGKKKSGA EGKQQDHYAL LGLSHLRYLA TEEQIRKSYR  120
ETALKYHPDK QAALLLNEET EAAKQTKKDE IESHFKSIQE AYEALIDPVK RRIYDSTDEF  180
DDEIPTDCAP QDFFKVFGPA FMRNGRWSVN QPIPFLGDEN TPLKEADSFY DFWYTFKSWR  240
EFPHTDEFDL EQAESRDHKR WMERQNAKLS EKARKEEYAR IRTLVDNAYK RDPRIVRRKE  300
AEKAEKQRKK EAKYLAKKLQ EEEAARAVEE EKRRKEEEEK RAAEIALQQK KLKEKEKKLL  360
RKERSRLRTL SGPVISNRLL SLAEDDVESL CMSLDIEQLR NICERMEGKE GLERAEVLRD  420
ACGYKNDLEG KKEDEKKTLQ QNGSVGTNGT VLLGSYEKKE KPWSREEIEL LRKGMLKFPK  480
GTSRRWEVVS DYIGTGRSVE EILKATKTVL LQKPDSSKAF DSFLEKRKPT PSIASPLTTR  540
IEVEGVLTPP QGTETPAEKV DKSGESSSGS TKDQNPNDPI AENGVSSGSE QDVWSAVQER  600
ALVQALKTFP KEASQRWERV AAAVPGKTVN QCKKKFTLLK ESFRNKKSSA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	332	355	KRRKEEEEKRAAEIALQQKKLKEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11450.1	0.0	MYB family protein