PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g479290.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 245aa MW: 27224.7 Da PI: 6.1348 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 32.6 | 1.8e-10 | 79 | 116 | 1 | 39 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkq 39 +g WT++Ed llv++v ++G + W+ Ia+++ gR +kq Pd.00g479290.m01 79 KGQWTPQEDRLLVQLVGRFGIKKWSQIAKMLS-GRVGKQ 116 799*****************************.998876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MGPQSCIQLP PLINFGELGS SSAMAISLPS DEVTCNSSSS TEIEFCKRLS ADDQKKTKRL 60 CMRRPTSSKV LQKKPSIIKG QWTPQEDRLL VQLVGRFGIK KWSQIAKMLS GRVGKQSSTE 120 TTETTEQRNA LSSDHSRGFY FNQNNAESAN WALTAYHPDH ISNETSNNMY SQMGGSVSNL 180 FNFESYGFGG SFLVDQVTGV EEYRGNSMEA EMPLALEVKS LMQGPDDDHV KKEMDLLEMI 240 CQGKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27785.1 | 1e-19 | MYB family protein |