PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g470290.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family YABBY
Protein Properties Length: 231aa    MW: 25759.2 Da    PI: 8.1703
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g470290.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY2435.9e-75221942170
             YABBY   2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee...lleelkveeenlksnvekees 91 
                       ++ s s+q+Cyv+CnfC+t+lavsvP +slfk+vtvrCGhC++llsvn++      + ++hl + + ++   lle+++++ ++ + ++++ + 
  Pd.00g470290.m02  22 HLLSPSDQLCYVHCNFCDTVLAVSVPCSSLFKTVTVRCGHCSNLLSVNMRALLLPPPNNQHLPHPFFNTphnLLEDMRNAPSSNTLMNHQPNY 114
                       56789**********************************************99999******9998776456788888887777777666666 PP

             YABBY  92 astsvsseklsenedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                       +++s+ + +    +++e+p++p  v+rPPekrqrvPsaynrfik+eiqrika+nPdishreafsaaaknWahfP+ihfgl
  Pd.00g470290.m02 115 PNESIMAIRGGGLDHQEIPKPPAaVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGL 194
                       66666666667888999**999889*****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MSSAAASSTA FNSPDQQQQQ QHLLSPSDQL CYVHCNFCDT VLAVSVPCSS LFKTVTVRCG  60
HCSNLLSVNM RALLLPPPNN QHLPHPFFNT PHNLLEDMRN APSSNTLMNH QPNYPNESIM  120
AIRGGGLDHQ EIPKPPAAVN RPPEKRQRVP SAYNRFIKDE IQRIKAGNPD ISHREAFSAA  180
AKNWAHFPHI HFGLMPDQPV KKTNMRQQEG EDMLMKDGFF STPANVGVSP Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.11e-81YABBY family protein