PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g465780.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 1420aa MW: 157403 Da PI: 7.8783

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g465780.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.5	5.5e-07	733	775	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT +E+e + a +q G++ +++I +++ + q++++++ + Pd.00g465780.m01 733 AWTHQEEESFFAALRQVGKN-FEKITCRVQ-SKNKDQVRHYYYRL 775 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 1420 aa Download sequence
MGHLVNLLQL QTTLFFSNSP TCSSIALKPH TFEYLKANVL TSKCKAFGGG EMDALPHLQA 60 LRKFPREELV AKVVLVRFDS TILLREQGEE HRFQPNALFT IKYLHQSGAK VVLVSDWSVK 120 TNPRLFVAQS VAEFLSSLLE YKVVPVQCIS QNVVSKREGF EKGDILLLEN LSEFRGEVAN 180 CSNFSQALSS GVDIFVNDYF SRSHKILAST CGVARFCYAN LAGFHFEESL SQLRRATESN 240 TKPHVAIIGG GNLFDKAAAL HSLTSRCDGL VFVGMMSFQI MHALGLPVPL NLVEHGVLKE 300 ALDIVQVAHI RKVQILYPKD FWCKNDHLPK QLEIFPAHRI LDGWVPVDIG PASFVEMKSM 360 LSRCKKVTWI GPVKFHTSNC TKGASELAQM LNQLSQSNCN ITVVGNKACE AMVKESNSTF 420 NFTMIKDASV VWEFLKGRKL PGVMALDRAY PFDIDWSDAY SDPAQHLVVD IGSGNGMFLL 480 GMAKTRKDLN FLGLEINKKL VKRCLDSVHW RGIRNGYFIA TNATSTFRSI ISSYPGKLVL 540 VSIQCPNPDF NEPDHRWSML QRSLVEAVAD LLTANGKVFL QSDIEAVSLR MKEQFQRYGK 600 GKLTVVHEQS FAITNSGWLK DNPFGVQSDW EQHVLARGDP IRLSEDSIRF LFAFLQSQEL 660 VRSILGFSGF FEISISLVCT KLEIGSTVIV NSEAHPHQGG FFVQDGGPGL ATSTSNHVAL 720 QQPVKKPTRQ WAAWTHQEEE SFFAALRQVG KNFEKITCRV QSKNKDQVRH YYYRLVRRMN 780 KLLGPGLYLD SKNSKDTNAA MLRWWSLLEK YSCKASKLHL KPRRFKIFIE ALEHQLLKDR 840 KKSVRKRPSQ GENCPPNAPS TLSNQNRPSG HDNRTVKLVL VDSHNIQKLG PGKASLKRNV 900 NIGVNRSNKG DSSTMKPARQ RRKPGALSSA AYKKWEKAAI AGVSLVADAA EHLERAITDK 960 EVEQDRSAAG QSSTVPVGKV LPPMPAFVQN IDAESGINNC MKLKLQLFPI DDGTRKALEN 1020 DKHNPYLELT LSTRKKISSV LDHLNRKWGN SNVASGELTL FHYSVQRDNL MGYPRWTQDS 1080 IVSAADVYAT IGCPPVFRLR YGWFSNTELG SVGLQTPVAS CSNQAEEPNE INGYICASPN 1140 NNFVGDPTEI MSWHKKEAGD QSTSRHRGDV DDLRSITGTA LSAGVWADSL TNISMGDLLS 1200 GVSHDLDTNC IDPPVAEGSQ CLQQIPFSCD SFDAVIAAHI SRQNKMGCQA TMECHVSSIW 1260 DAEETCDAFS FQKNSVFCQE VSSLSAVAPP GASSAGSDCM VEEIPVVERP IDDPPQGGPT 1320 DECQSDPRIL ESSVKDFNAL TDIYWPESLG PLDLEMPSSK YHSEDFVLSD SLSGLNRLIA 1380 SSLDAFQNCS FFGANKREPT ASVEARETAS FSDFKIGNGV

Sequence ? help Back to Top

Protein Sequence Length: 1420 aa Download sequence

MGHLVNLLQL QTTLFFSNSP TCSSIALKPH TFEYLKANVL TSKCKAFGGG EMDALPHLQA  60
LRKFPREELV AKVVLVRFDS TILLREQGEE HRFQPNALFT IKYLHQSGAK VVLVSDWSVK  120
TNPRLFVAQS VAEFLSSLLE YKVVPVQCIS QNVVSKREGF EKGDILLLEN LSEFRGEVAN  180
CSNFSQALSS GVDIFVNDYF SRSHKILAST CGVARFCYAN LAGFHFEESL SQLRRATESN  240
TKPHVAIIGG GNLFDKAAAL HSLTSRCDGL VFVGMMSFQI MHALGLPVPL NLVEHGVLKE  300
ALDIVQVAHI RKVQILYPKD FWCKNDHLPK QLEIFPAHRI LDGWVPVDIG PASFVEMKSM  360
LSRCKKVTWI GPVKFHTSNC TKGASELAQM LNQLSQSNCN ITVVGNKACE AMVKESNSTF  420
NFTMIKDASV VWEFLKGRKL PGVMALDRAY PFDIDWSDAY SDPAQHLVVD IGSGNGMFLL  480
GMAKTRKDLN FLGLEINKKL VKRCLDSVHW RGIRNGYFIA TNATSTFRSI ISSYPGKLVL  540
VSIQCPNPDF NEPDHRWSML QRSLVEAVAD LLTANGKVFL QSDIEAVSLR MKEQFQRYGK  600
GKLTVVHEQS FAITNSGWLK DNPFGVQSDW EQHVLARGDP IRLSEDSIRF LFAFLQSQEL  660
VRSILGFSGF FEISISLVCT KLEIGSTVIV NSEAHPHQGG FFVQDGGPGL ATSTSNHVAL  720
QQPVKKPTRQ WAAWTHQEEE SFFAALRQVG KNFEKITCRV QSKNKDQVRH YYYRLVRRMN  780
KLLGPGLYLD SKNSKDTNAA MLRWWSLLEK YSCKASKLHL KPRRFKIFIE ALEHQLLKDR  840
KKSVRKRPSQ GENCPPNAPS TLSNQNRPSG HDNRTVKLVL VDSHNIQKLG PGKASLKRNV  900
NIGVNRSNKG DSSTMKPARQ RRKPGALSSA AYKKWEKAAI AGVSLVADAA EHLERAITDK  960
EVEQDRSAAG QSSTVPVGKV LPPMPAFVQN IDAESGINNC MKLKLQLFPI DDGTRKALEN  1020
DKHNPYLELT LSTRKKISSV LDHLNRKWGN SNVASGELTL FHYSVQRDNL MGYPRWTQDS  1080
IVSAADVYAT IGCPPVFRLR YGWFSNTELG SVGLQTPVAS CSNQAEEPNE INGYICASPN  1140
NNFVGDPTEI MSWHKKEAGD QSTSRHRGDV DDLRSITGTA LSAGVWADSL TNISMGDLLS  1200
GVSHDLDTNC IDPPVAEGSQ CLQQIPFSCD SFDAVIAAHI SRQNKMGCQA TMECHVSSIW  1260
DAEETCDAFS FQKNSVFCQE VSSLSAVAPP GASSAGSDCM VEEIPVVERP IDDPPQGGPT  1320
DECQSDPRIL ESSVKDFNAL TDIYWPESLG PLDLEMPSSK YHSEDFVLSD SLSGLNRLIA  1380
SSLDAFQNCS FFGANKREPT ASVEARETAS FSDFKIGNGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.3	0.0	MYB_related family protein