PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g463140.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 856aa    MW: 96165.7 Da    PI: 5.78
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g463140.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS286.76.3e-884918542374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        + Ll++Ae v  +++e+a++lL r + +a  +g+p+qR+++yf+eAL++r+ r++ ++ ++ +  + s +  s++   + + ++  P++ + 
  Pd.00g463140.m01 491 AHILLAAAEKVGYQQFERANRLLLRCEWIAYFKGNPVQRVVFYFAEALRERIERETGSIPSKAKEMSISGHGLSTNP-TYIACHQEVPFHSVM 582
                       699***************************************************77777666655555543344443.444466778****** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrl 186
                       ++t  qaI e+v+ e++vH iD++i  G+QW  L+++La+R+e p   l iT+vg+     k+++eetg+rL+++Ae+l++pf+f++++ +++
  Pd.00g463140.m01 583 QFTGIQAIIESVSLESKVHLIDLEIRSGVQWTGLMESLAEREECPVeLLTITAVGE---AGKQKIEETGKRLTSVAESLNIPFQFKAVIISAM 672
                       ******************************************7666489*******...589******************************* PP

              GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres 279
                       ed++ + ++v+ +Ea+aV   l l ++ +++ +le+    +++++++l P ++vv+e ea+hns+sF++rf++al yysa+fd+le+ + +++
  Pd.00g463140.m01 673 EDIKDQLFDVEDDEAVAVYAPLILRTMISRPSCLEN----LMRVMRNLTPCIMVVIEVEANHNSPSFVNRFIDALFYYSAFFDCLETCM-KQE 760
                       ****************************88888888....***********************************************96.555 PP

              GRAS 280 eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSa 372
                       e r+ +E   +++ i+n+va+eg+er+ r  ++  Wr+ + ++G+ ++++s+    qa+l++++++    +++ + ++l+ gWk+ p+ svSa
  Pd.00g463140.m01 761 EYRVLMEDL-FREGIRNIVAAEGSERVVRSVKMDVWRAFFARFGMVEMNFSNASLYQASLVVKRFGCPSCTLDRNGKCLIVGWKGTPIHSVSA 852
                       667777766.********************************************************999************************ PP

              GRAS 373 Wr 374
                       W+
  Pd.00g463140.m01 853 WK 854
                       *8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 856 aa     Download sequence    
MSFQNYLDWE QSAKKLLMSL TSFLKQPFHT LTITLLSLLL PLSFLLLARL SCANSLLSLS  60
FIPLHPDPNY STTTTSSTLF SLLRYATPSL LYILVSIVST AAFIHCLTGK ITIITEFPTP  120
IFRPRLYTAW IFLCTLQVCV GLGIEGSIAS GINGATFSGV DERICLLSRA IFFLGLHETM  180
LHWCRVVVKP VVDDTVFGAA RGEKWVERVA VAASFGCIWW WRLRDEVESL VVVAKAKREL  240
SMGIGVADFV GWWLYYLTVT IGMVRVVKGV MWLSMVLLCR RRSGGGNFAN SCAEDRDLQD  300
NKNMANAFFP FTPFDFGVLG GLTPQLEDYE KDQEVAFKVK RGHLFAIEEL GLGEMDSALS  360
SEHGFYQEDT QPIQDGTHQF TYNQIGGSDI AETNKDLPHQ SSLAVLELLN SYGSAFKKLR  420
GERTSSNTGN EAEASSYVGQ QKLSTEEIMR VAGERYVQFS NQGYGDFYPL HPFGYALTGL  480
SEEETKDAEL AHILLAAAEK VGYQQFERAN RLLLRCEWIA YFKGNPVQRV VFYFAEALRE  540
RIERETGSIP SKAKEMSISG HGLSTNPTYI ACHQEVPFHS VMQFTGIQAI IESVSLESKV  600
HLIDLEIRSG VQWTGLMESL AEREECPVEL LTITAVGEAG KQKIEETGKR LTSVAESLNI  660
PFQFKAVIIS AMEDIKDQLF DVEDDEAVAV YAPLILRTMI SRPSCLENLM RVMRNLTPCI  720
MVVIEVEANH NSPSFVNRFI DALFYYSAFF DCLETCMKQE EYRVLMEDLF REGIRNIVAA  780
EGSERVVRSV KMDVWRAFFA RFGMVEMNFS NASLYQASLV VKRFGCPSCT LDRNGKCLIV  840
GWKGTPIHSV SAWKFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.11e-49GRAS family protein