PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g440260.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 529aa    MW: 58634.9 Da    PI: 6.5084
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g440260.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS371.21.4e-1131575281374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal..ppsetseknsseelaalklfsevsPil 91 
                       lv+lL++cAeav+ +d++ a+alL++l+ +a   g+++qR+a++f+++La+rla  ++  +  +  +p ++++   +++  al+l +e++P +
  Pd.00g440260.m01 157 LVQLLIACAEAVACRDKSHASALLSELRANALVFGSSFQRVASCFVQGLANRLALVQPLGAVGFigSPMNAKDFALDKKEEALRLVYEICPHI 249
                       689**************************************************9955544434413444444444999999************ PP

              GRAS  92 kfshltaNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefn 179
                       +f+h++aN+ Ilea+ege+ vH++D++++    +G QW  L+++La+R+++pp +lRiTgvg       ++l+ +g+ L+ +A++lg+++ef+
  Pd.00g440260.m01 250 QFGHFVANSSILEAFEGESYVHVVDLGMTlglpHGDQWRGLIESLATRAGQPPsRLRITGVGL----YGDRLQIIGDELEAYADRLGINLEFS 338
                       *************************99873333667*************888879********....9************************* PP

              GRAS 180 vlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsle 272
                       v v+++le+l++e++++  gE+l+Vn++lqlh +++es    +   +vL++v +lsPk++v+veq+++hn++ Fl rf+eal+yysa+fdsl+
  Pd.00g440260.m01 339 V-VESNLENLRPEDIKLLDGEVLVVNSILQLHCVVKESRGALN---SVLQMVHELSPKILVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLD 427
                       9.7********************************88877777...8********************************************** PP

              GRAS 273 aklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkd 364
                       a lp+ +  r+k+E++++++ei+n+++ceg +r+erhe++ +Wr+r+++aGF+++p++  +  +ak  l k+k  +gy++ ee+g+lvlgWk+
  Pd.00g440260.m01 428 AMLPKYDTRRAKMEQFYFAEEIKNIISCEGPARVERHERVDQWRRRMSRAGFQAAPIK--MLVNAKQWLGKIKvCEGYTILEEKGCLVLGWKS 518
                       ********************************************************97..5678999******99****************** PP

              GRAS 365 rpLvsvSaWr 374
                       +p+v++S+W+
  Pd.00g440260.m01 519 KPIVAASCWK 528
                       *********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 529 aa     Download sequence    
MAPSRNFMPK EYMVNHERTN KMSAFDLISH SAMSCYSNPY MPLLEEGNAS ALTLPYSDES  60
GDHKRLKRTI SIAESMSSHN SLYSGGSNNS CVTNGSISRS SSTNSLNTLP RLHFRDHIWT  120
YSQRYLAAEA VEEAAAAMTN AEGNGAEEDG TADGMRLVQL LIACAEAVAC RDKSHASALL  180
SELRANALVF GSSFQRVASC FVQGLANRLA LVQPLGAVGF IGSPMNAKDF ALDKKEEALR  240
LVYEICPHIQ FGHFVANSSI LEAFEGESYV HVVDLGMTLG LPHGDQWRGL IESLATRAGQ  300
PPSRLRITGV GLYGDRLQII GDELEAYADR LGINLEFSVV ESNLENLRPE DIKLLDGEVL  360
VVNSILQLHC VVKESRGALN SVLQMVHELS PKILVLVEQD SSHNGPFFLG RFMEALHYYS  420
AIFDSLDAML PKYDTRRAKM EQFYFAEEIK NIISCEGPAR VERHERVDQW RRRMSRAGFQ  480
AAPIKMLVNA KQWLGKIKVC EGYTILEEKG CLVLGWKSKP IVAASCWKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.12e-80GRAS family protein