PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g437230.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 301aa    MW: 32962 Da    PI: 6.8014
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g437230.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.12.1e-1357101347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT+eE+  ++ + ++lG+g+W+ Iar   ++Rt+ q+ s+ qky
  Pd.00g437230.m01  57 PWTEEEHRMFLIGLQKLGKGDWRGIARNYVTTRTPTQVASHAQKY 101
                       8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MGNLSSAAHY HSSSPNPDSP SSDLHDPVHV PEGYLSDDPA HASSSGNRRG DRKKGTPWTE  60
EEHRMFLIGL QKLGKGDWRG IARNYVTTRT PTQVASHAQK YFIRQSNATR RKRRSSLFDM  120
VPDMAMDPPP VPEEQVFLPN CQEAESEAAS SLPSLNLSLS SECKPMETTH EEKVKEPDHE  180
PVMGSNGFPP MIPGFFPAYL PYPFPVWPPS AGPMRELKGG EASHQQVLRP IPILRKEPVN  240
VDALVGMSQL SLGDTERGHK EPSPLSLKLL GEPSRQSAFH PNAPAGEPDL SKGKSSAIQA  300
V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16350.14e-70MYB_related family protein